RNA–Protein interactions for RNA: ENST00000352993.7

BRCA1-201, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5 BASIC

Gene BRCA1, Length 3,668 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-201ENST00000352993 ZDHHC6Q9H6R6 413 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 TMEM185BQ9H7F4 350 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 EQTNQ9NQ60 294 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 HINT3Q9NQE9 182 aaKnown RBP7.13□□□□□ -1.27
BRCA1-201ENST00000352993 SLC22A11Q9NSA0 550 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 MARK1Q9P0L2 795 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 ING1Q9UK53 422 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-201ENST00000352993 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-201ENST00000352993 ABHD14A-ACY1A0A1B0GW23 586 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 GFYI3L273 518 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 TO15178 435 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 IGSF6O95976 241 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 ATF1P18846 271 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 HLA-FP30511 346 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 KCNJ3P48549 501 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 RAG2P55895 527 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 CLDN12P56749 244 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 C21orf58P58505 322 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 S100A12P80511 92 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 NDUFAF6Q330K2 333 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 LRRC37A5PQ49AS3 106 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 FCRLBQ6BAA4 426 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 FAM71E1Q6IPT2 247 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 ZCCHC12Q6PEW1 402 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 ZNF783Q6ZMS7 281 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 SPAG16Q8N0X2 631 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 C12orf45Q8N5I9 185 aaPredicted RBP7.13□□□□□ -1.27
BRCA1-201ENST00000352993 OR4Q3Q8NH05 313 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 OSTF1Q92882 214 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 WNT2BQ93097 391 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 UROC1Q96N76 676 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 DMRTA2Q96SC8 542 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 ESRP2Q9H6T0 727 aaKnown RBP7.13□□□□□ -1.27
BRCA1-201ENST00000352993 PURGQ9UJV8 347 aaKnown RBP7.13□□□□□ -1.27
BRCA1-201ENST00000352993 IRAK3Q9Y616 596 aa7.13□□□□□ -1.27
BRCA1-201ENST00000352993 KDM4EB2RXH2 506 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-201ENST00000352993 HMGN4O00479 90 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 ERAL1O75616 437 aaKnown RBP7.12□□□□□ -1.27
BRCA1-201ENST00000352993 KRT33AO76009 404 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 THBS2P35442 1172 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 PAN3Q58A45 887 aaKnown RBP7.12□□□□□ -1.27
BRCA1-201ENST00000352993 TMEM255AQ5JRV8 349 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 PLEKHS1Q5SXH7 462 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 FAM69AQ5T7M9 428 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 VASNQ6EMK4 673 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 KIAA1211LQ6NV74 962 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 COMTD1Q86VU5 262 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 NRMQ8IXM6 262 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 OR6V1Q8N148 313 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 LINC00471Q8N535 108 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 POGLUT1Q8NBL1 392 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 FCAMRQ8WWV6 532 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 SMPDL3AQ92484 453 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 ORAI1Q96D31 301 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 C4orf36Q96KX1 117 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 C11orf49Q9H6J7 331 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 HMX1Q9NP08 348 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-201ENST00000352993 DMRT3Q9NQL9 472 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 PIPOXQ9P0Z9 390 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 NDRG3Q9UGV2 375 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 CAMK2AQ9UQM7 478 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 A0A1B0GUH1 482 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 SLC38A8A6NNN8 435 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 F5H5P2 479 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 GNB5O14775 395 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 SLC16A5O15375 505 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 MAGEB4O15481 346 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-201ENST00000352993 COCHO43405 550 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 CDC123O75794 336 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-201ENST00000352993 STC2O76061 302 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 HIST1H2ABP04908 130 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 S100A6P06703 90 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 FABP1P07148 127 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 IFNGR1P15260 489 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 IMPA1P29218 277 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 BMP8BP34820 402 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 DLX5P56178 289 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 TBPL1P62380 186 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 RIPPLY1Q0D2K3 151 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 KLF9Q13886 244 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-201ENST00000352993 LINC00303Q3SY05 128 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 C4orf46Q504U0 113 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 SLC25A30Q5SVS4 291 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 HIST3H2AQ7L7L0 130 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 BMP8AQ7Z5Y6 402 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 TBC1D19Q8N5T2 526 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 OR5M9Q8NGP3 310 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 THAP6Q8TBB0 222 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 HIST1H2ACQ93077 130 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 WBP2Q969T9 261 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 C10orf90Q96M02 699 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 PRRC1Q96M27 445 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 ZNF471Q9BX82 626 aaPredicted RBP7.12□□□□□ -1.27
BRCA1-201ENST00000352993 SLC19A3Q9BZV2 496 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 SEMA4CQ9C0C4 833 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 MYNNQ9NPC7 610 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 NIT2Q9NQR4 276 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 MRPS18AQ9NVS2 196 aaKnown RBP7.12□□□□□ -1.27
BRCA1-201ENST00000352993 CTSFQ9UBX1 484 aa7.12□□□□□ -1.27
BRCA1-201ENST00000352993 CA5BQ9Y2D0 317 aa7.12□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms