RNA–Protein interactions for RNA: ENST00000348259.9

MRPL55-204, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 661 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-204ENST00000348259 FAM180BQ6P0A1 224 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 ZCCHC12Q6PEW1 402 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 ANGPTL8Q6UXH0 198 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 TMEM200AQ86VY9 491 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 KRTAP1-3Q8IUG1 177 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 LIX1LQ8IVB5 337 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 SVOPLQ8N434 492 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 APCDD1LQ8NCL9 501 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 OR5T3Q8NGG3 340 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 FAM110BQ8TC76 370 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 SLC38A5Q8WUX1 472 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 RASSF5Q8WWW0 418 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 LZICQ8WZA0 190 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 RND1Q92730 232 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 MAL2Q969L2 176 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 ARSGQ96EG1 525 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 SLC35G5Q96KT7 338 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 ZNF570Q96NI8 536 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 NR1H4Q96RI1 486 aaPredicted RBP8.9□□□□□ -0.98
MRPL55-204ENST00000348259 CSF3RQ99062 836 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 SEMA6AQ9H2E6 1030 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 Q9H521 79 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 COQ10BQ9H8M1 238 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 SLC24A3Q9HC58 644 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 DEPPQ9NTK1 212 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 ZCCHC3Q9NUD5 404 aaKnown RBP8.9□□□□□ -0.98
MRPL55-204ENST00000348259 GIN1Q9NXP7 522 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 DNAJB12Q9NXW2 375 aaKnown RBP8.9□□□□□ -0.98
MRPL55-204ENST00000348259 ZNF223Q9UK11 482 aaPredicted RBP8.9□□□□□ -0.98
MRPL55-204ENST00000348259 LIPT1Q9Y234 373 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 MRPS33Q9Y291 106 aaKnown RBP8.9□□□□□ -0.98
MRPL55-204ENST00000348259 KLF13Q9Y2Y9 288 aaPredicted RBP8.9□□□□□ -0.98
MRPL55-204ENST00000348259 CLDN16Q9Y5I7 305 aa8.9□□□□□ -0.98
MRPL55-204ENST00000348259 CUBNO60494 3623 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 ANK2Q01484 3957 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 GIMAP1-GIMAP5A0A087WTJ2 511 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 TCRBV16S1A1N1A0A5B0 115 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 PINLYPA6NC86 204 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 M0QX08 132 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 TFECO14948 347 aaPredicted RBP8.89□□□□□ -0.99
MRPL55-204ENST00000348259 ZNF682O95780 498 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 HPRP00739 348 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 CST1P01037 141 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 IGHG3P01860 377 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 HMGN2P05204 90 aaKnown RBP8.89□□□□□ -0.99
MRPL55-204ENST00000348259 ETS2P15036 469 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 MATN1P21941 496 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 RFC3P40938 356 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 GPR143P51810 404 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 HSD17B7P56937 341 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 KCNJ10P78508 379 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 DUSP2Q05923 314 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 MAP4K2Q12851 820 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 TP53BP2Q13625 1128 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 MAPK11Q15759 364 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 ZNF750Q32MQ0 723 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 IQCCQ4KMZ1 466 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 LRRC23Q53EV4 343 aaPredicted RBP8.89□□□□□ -0.99
MRPL55-204ENST00000348259 ZNF628Q5EBL2 1059 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 ARHGAP11AQ6P4F7 1023 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 QSOX2Q6ZRP7 698 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 MDGA2Q7Z553 956 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 ARMC8Q8IUR7 673 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 ZDHHC21Q8IVQ6 265 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 NUP43Q8NFH3 380 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 OR9A2Q8NGT5 310 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 NFKBIDQ8NI38 313 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 PMM1Q92871 262 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 ANKRD9Q96BM1 317 aaPredicted RBP8.89□□□□□ -0.99
MRPL55-204ENST00000348259 CTHRC1Q96CG8 243 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 GIMAP5Q96F15 307 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 NRBF2Q96F24 287 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 PEX11GQ96HA9 241 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 HSH2DQ96JZ2 352 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 C7orf34Q96L11 122 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 RDH12Q96NR8 316 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 MS4A4EQ96PG1 132 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 ZNF607Q96SK3 696 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 SLC29A1Q99808 456 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 CIB1Q99828 191 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 SPATA5L1Q9BVQ7 753 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 BTBD2Q9BX70 525 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 OSBPL11Q9BXB4 747 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 ACTRT3Q9BYD9 372 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 RBCK1Q9BYM8 510 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 OR51I1Q9H343 314 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 SERHL2Q9H4I8 314 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 RASSF1Q9NS23 344 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 CALML5Q9NZT1 146 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 P2RX2Q9UBL9 471 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 OAZ3Q9UMX2 235 aa8.89□□□□□ -0.99
MRPL55-204ENST00000348259 C19orf53Q9UNZ5 99 aaPredicted RBP8.89□□□□□ -0.99
MRPL55-204ENST00000348259 RTTNQ86VV8 2226 aa8.88□□□□□ -0.99
MRPL55-204ENST00000348259 A0A0G2JNJ9 132 aa8.88□□□□□ -0.99
MRPL55-204ENST00000348259 A0A0G2JPF8 293 aa8.88□□□□□ -0.99
MRPL55-204ENST00000348259 A0A1B0GVC2 190 aa8.88□□□□□ -0.99
MRPL55-204ENST00000348259 SYNDIG1LA6NDD5 238 aa8.88□□□□□ -0.99
MRPL55-204ENST00000348259 ZNF860A6NHJ4 632 aa8.88□□□□□ -0.99
MRPL55-204ENST00000348259 HNRNPCL2B2RXH8 293 aa8.88□□□□□ -0.99
MRPL55-204ENST00000348259 HNRNPCL3B7ZW38 293 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 94 ms