RNA–Protein interactions for RNA: ENST00000345865.6

UPF3B-202, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UPF3B, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-202ENST00000345865 FAM181AQ8N9Y4 354 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 OR51G2Q8NGK0 314 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 FANK1Q8TC84 345 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 CNOT9Q92600 299 aaKnown RBP14.31□□□□□ -0.12
UPF3B-202ENST00000345865 NACC2Q96BF6 587 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 TBC1D17Q9HA65 648 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 PAIP2BQ9ULR5 123 aaKnown RBP14.31□□□□□ -0.12
UPF3B-202ENST00000345865 MMP17Q9ULZ9 603 aa14.31□□□□□ -0.12
UPF3B-202ENST00000345865 TRDV1A0A1B0GX56 115 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 A0A1W2PQ09 198 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 TGFBR3LH3BV60 316 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 HMGN1P05114 100 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 S1PR1P21453 382 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 RABIFP47224 123 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 CSTF1Q05048 431 aaKnown RBP14.3□□□□□ -0.12
UPF3B-202ENST00000345865 TAF8Q7Z7C8 310 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 OR4N2Q8NGD1 307 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 OR52R1Q8NGF1 315 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 OR13C2Q8NGS9 318 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 HS6ST2Q96MM7 605 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 CD180Q99467 661 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 TEX12Q9BXU0 123 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 WDR70Q9NW82 654 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 USP36Q9P275 1121 aaKnown RBP14.3□□□□□ -0.12
UPF3B-202ENST00000345865 TNFRSF10DQ9UBN6 386 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 SPACA6W5XKT8 324 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 SPTY2D1-AS1A0A0U1RR47 76 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 LINC00854A0A1B0GVQ3 168 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 OR5K3A6NET4 321 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 A8MU76 341 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 PRAMEF26H0Y7S4 382 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 HRKO00198 91 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 NCR1O76036 304 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 ATP6V1E1P36543 226 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 CASP3P42574 277 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 POU6F2P78424 691 aaPredicted RBP14.3□□□□□ -0.12
UPF3B-202ENST00000345865 PSG6Q00889 435 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 KRR1Q13601 381 aaKnown RBP14.3□□□□□ -0.12
UPF3B-202ENST00000345865 FZD2Q14332 565 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 MANEAQ5SRI9 462 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 NIPAL3Q6P499 406 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 ZCCHC12Q6PEW1 402 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 ZNF322Q6U7Q0 402 aaPredicted RBP14.3□□□□□ -0.12
UPF3B-202ENST00000345865 FAM131AQ6UXB0 335 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 AKAP14Q86UN6 197 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 KLBQ86Z14 1044 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 RNF113BQ8IZP6 322 aaKnown RBP14.3□□□□□ -0.12
UPF3B-202ENST00000345865 KLHL36Q8N4N3 616 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 NLGN4YQ8NFZ3 816 aaPredicted RBP14.3□□□□□ -0.12
UPF3B-202ENST00000345865 PTP4A1Q93096 173 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 KISS1RQ969F8 398 aaPredicted RBP14.3□□□□□ -0.12
UPF3B-202ENST00000345865 GSDMCQ9BYG8 508 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 FLRT3Q9NZU0 649 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 POU2F3Q9UKI9 436 aa14.3□□□□□ -0.12
UPF3B-202ENST00000345865 SIRT4Q9Y6E7 314 aaPredicted RBP14.3□□□□□ -0.12
UPF3B-202ENST00000345865 FAM221BA6H8Z2 402 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 IGKV1D-16P01601 117 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 APOA1P02647 267 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 TMED10P49755 219 aaKnown RBP14.29□□□□□ -0.12
UPF3B-202ENST00000345865 HHEXQ03014 270 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 ACSM1Q08AH1 577 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 SFSWAPQ12872 951 aaKnown RBP14.29□□□□□ -0.12
UPF3B-202ENST00000345865 TAB1Q15750 504 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 TMEM44Q2T9K0 475 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 ZNF362Q5T0B9 420 aaPredicted RBP14.29□□□□□ -0.12
UPF3B-202ENST00000345865 PDZK1Q5T2W1 519 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 FCRLBQ6BAA4 426 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 Q6ZS52 159 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 SLC44A3Q8N4M1 653 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 ZNF655Q8N720 491 aaPredicted RBP14.29□□□□□ -0.12
UPF3B-202ENST00000345865 TMEM99Q8N816 258 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 GALNT6Q8NCL4 622 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 OR52N1Q8NH53 320 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 GRHL3Q8TE85 626 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 HOXB13Q92826 284 aaPredicted RBP14.29□□□□□ -0.12
UPF3B-202ENST00000345865 TMCO6Q96DC7 493 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 BPIFA2Q96DR5 249 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 DIRAS2Q96HU8 199 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 PTCHD1Q96NR3 888 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 TRPV5Q9NQA5 729 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 C2orf42Q9NWW7 574 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 H2AFY2Q9P0M6 372 aaPredicted RBP14.29□□□□□ -0.12
UPF3B-202ENST00000345865 CYP8B1Q9UNU6 501 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 SIGLEC7Q9Y286 467 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 GSTK1Q9Y2Q3 226 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 TRAV27A0A087WT01 109 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 KIR2DS5A0A0G2JLQ3 304 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 A0A0G2JNG1 304 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 C2orf92A0A1B0GVN3 265 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 OR2W5A6NFC9 320 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 KIR2DS3K7RE56 304 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 GABRPO00591 440 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 CHST10O43529 356 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 NKX2-2O95096 273 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 NGFRP08138 427 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 CSF3P09919 207 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 IL9P15248 144 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 DRD5P21918 477 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 EMDP50402 254 aa14.29□□□□□ -0.12
UPF3B-202ENST00000345865 RAB38P57729 211 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms