RNA–Protein interactions for RNA: ENST00000344824.10

TPM4-202, Transcript of tropomyosin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TPM4, Length 1,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-202ENST00000344824 MUC13Q9H3R2 512 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 RUBCNLQ9H714 662 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 ZNF703Q9H7S9 590 aaPredicted RBP12.6□□□□□ -0.39
TPM4-202ENST00000344824 SH2D2AQ9NP31 389 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 ZFP64Q9NPA5 681 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 DUSP22Q9NRW4 184 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 TNFRSF10DQ9UBN6 386 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 PCDHGB3Q9Y5G1 929 aa12.6□□□□□ -0.39
TPM4-202ENST00000344824 NPIPA5A0A0B4J1W7 369 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 LRRC3CA6NJW4 275 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 NPIPA7E9PJI5 369 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 UGT2B11O75310 529 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 ENTPD5O75356 428 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 GLSO94925 669 aaPredicted RBP12.59□□□□□ -0.39
TPM4-202ENST00000344824 ZNF682O95780 498 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 CLDN1O95832 211 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 SERPINA1P01009 418 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 RFPL3SP0C7P2 107 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 NPIPA8P0DM63 369 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 MAP3K8P41279 467 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 CRISP3P54108 245 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 ELF3P78545 371 aaPredicted RBP12.59□□□□□ -0.39
TPM4-202ENST00000344824 MRPS22P82650 360 aaKnown RBP12.59□□□□□ -0.39
TPM4-202ENST00000344824 FOXO1Q12778 655 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 VEZF1Q14119 521 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 ARHGAP11BQ3KRB8 267 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 INTS11Q5TA45 600 aaKnown RBP12.59□□□□□ -0.39
TPM4-202ENST00000344824 LCN8Q6JVE9 175 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 MAMDC2Q7Z304 686 aaPredicted RBP12.59□□□□□ -0.39
TPM4-202ENST00000344824 FGD2Q7Z6J4 655 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 SLC30A8Q8IWU4 369 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 OR5M9Q8NGP3 310 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 OR10Q1Q8NGQ4 319 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 FAM57AQ8TBR7 257 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 HOXB13Q92826 284 aaPredicted RBP12.59□□□□□ -0.39
TPM4-202ENST00000344824 RELTQ969Z4 430 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 EFHD2Q96C19 240 aaPredicted RBP12.59□□□□□ -0.39
TPM4-202ENST00000344824 BTBD9Q96Q07 612 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 NODALQ96S42 347 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 SLC6A15Q9H2J7 730 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 ZDHHC11Q9H8X9 412 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 GALNT9Q9HCQ5 603 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 FBXO34Q9NWN3 711 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 MKLN1Q9UL63 735 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 CBLCQ9ULV8 474 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 LIPT1Q9Y234 373 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 ZNF835Q9Y2P0 537 aa12.59□□□□□ -0.39
TPM4-202ENST00000344824 GPR55Q9Y2T6 319 aaPredicted RBP12.59□□□□□ -0.39
TPM4-202ENST00000344824 CENPEQ02224 2701 aa12.58□□□□□ -0.39
TPM4-202ENST00000344824 C2orf72A6NCS6 295 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 PRAMEF25A6NGN4 478 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 TTC36A6NLP5 189 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 GCM2O75603 506 aaPredicted RBP12.58□□□□□ -0.4
TPM4-202ENST00000344824 TRAPPC6AO75865 159 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 KCNK2O95069 426 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 PGM3O95394 542 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 IGKV1D-16P01601 117 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 ATP6V1C1P21283 382 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 DRD5P21918 477 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 COL8A1P27658 744 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 KDELR2P33947 212 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 CASP3P42574 277 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 ACTR3P61158 418 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 CHRNEQ04844 493 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 GNA13Q14344 377 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 SLC10A1Q14973 349 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 GPR68Q15743 365 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 FXNQ16595 210 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 HEPHL1Q6MZM0 1159 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 MTFR2Q6P444 385 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 Q6ZPB1 254 aaPredicted RBP12.58□□□□□ -0.4
TPM4-202ENST00000344824 MRGPRGQ86SM5 289 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 PACS2Q86VP3 889 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 CHERPQ8IWX8 916 aaKnown RBP12.58□□□□□ -0.4
TPM4-202ENST00000344824 EID3Q8N140 333 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 BBS10Q8TAM1 723 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 SLC26A7Q8TE54 656 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 COL21A1Q96P44 957 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 TRNT1Q96Q11 434 aaKnown RBP12.58□□□□□ -0.4
TPM4-202ENST00000344824 ADOQ96SZ5 270 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 SDF2Q99470 211 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 TREX2Q9BQ50 279 aaPredicted RBP12.58□□□□□ -0.4
TPM4-202ENST00000344824 QRSL1Q9H0R6 528 aaKnown RBP12.58□□□□□ -0.4
TPM4-202ENST00000344824 PROK2Q9HC23 129 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 RYDENQ9NUL5 291 aaKnown RBP12.58□□□□□ -0.4
TPM4-202ENST00000344824 WDR45Q9Y484 360 aa12.58□□□□□ -0.4
TPM4-202ENST00000344824 TRGV5A0A0B4J1U4 118 aa12.57□□□□□ -0.4
TPM4-202ENST00000344824 M0QX08 132 aa12.57□□□□□ -0.4
TPM4-202ENST00000344824 FCMRO60667 390 aa12.57□□□□□ -0.4
TPM4-202ENST00000344824 AK1P00568 194 aa12.57□□□□□ -0.4
TPM4-202ENST00000344824 RNF144AP50876 292 aaPredicted RBP12.57□□□□□ -0.4
TPM4-202ENST00000344824 ENPP6Q6UWR7 440 aa12.57□□□□□ -0.4
TPM4-202ENST00000344824 FRRS1Q6ZNA5 592 aa12.57□□□□□ -0.4
TPM4-202ENST00000344824 LRRC74BQ6ZQY2 392 aa12.57□□□□□ -0.4
TPM4-202ENST00000344824 TRILQ7L0X0 811 aa12.57□□□□□ -0.4
TPM4-202ENST00000344824 NUP54Q7Z3B4 507 aa12.57□□□□□ -0.4
TPM4-202ENST00000344824 ZAR1Q86SH2 424 aa12.57□□□□□ -0.4
TPM4-202ENST00000344824 DOLPP1Q86YN1 238 aa12.57□□□□□ -0.4
TPM4-202ENST00000344824 SMYD1Q8NB12 490 aa12.57□□□□□ -0.4
TPM4-202ENST00000344824 CHDHQ8NE62 594 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms