RNA–Protein interactions for RNA: ENST00000344726.9

HMGN3-202, Transcript of high mobility group nucleosomal binding domain 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGN3, Length 872 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN3-202ENST00000344726 NDUFAF6Q330K2 333 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 SLC9B1Q4ZJI4 515 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 AGBL2Q5U5Z8 902 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 ATG16L1Q676U5 607 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 LUZP2Q86TE4 346 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 MISPQ8IVT2 679 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 GTPBP8Q8N3Z3 284 aaPredicted RBP12.98□□□□□ -0.33
HMGN3-202ENST00000344726 METTL25Q8N6Q8 603 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 CHDHQ8NE62 594 aaPredicted RBP12.98□□□□□ -0.33
HMGN3-202ENST00000344726 B4GALNT2Q8NHY0 566 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 LINC01560Q8TB33 94 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 PHOSPHO1Q8TCT1 267 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 ACTRT2Q8TDY3 377 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 MAELQ96JY0 434 aaKnown RBP12.98□□□□□ -0.33
HMGN3-202ENST00000344726 SLC35G5Q96KT7 338 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 PINK1Q9BXM7 581 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 SLC24A3Q9HC58 644 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 RASSF1Q9NS23 344 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 DNAJB12Q9NXW2 375 aaKnown RBP12.98□□□□□ -0.33
HMGN3-202ENST00000344726 KCNE5Q9UJ90 142 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 GPR45Q9Y5Y3 372 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 AP4B1Q9Y6B7 739 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 PRR14LQ5THK1 2151 aa12.98□□□□□ -0.33
HMGN3-202ENST00000344726 A0A087WZY1 265 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 C7orf72A4D263 438 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 SLC22A20A6NK97 555 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 A6NNC1 897 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 FCMRO60667 390 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 TNFRSF21O75509 655 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 OPN1LWP04000 364 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 LINGO3P0C6S8 592 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 IL11P20809 199 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 CLNS1AP54105 237 aaKnown RBP12.97□□□□□ -0.33
HMGN3-202ENST00000344726 ATP12AP54707 1039 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 FUT5Q11128 374 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 PON3Q15166 354 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 DPY19L1Q2PZI1 675 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 CTU2Q2VPK5 515 aaKnown RBP12.97□□□□□ -0.33
HMGN3-202ENST00000344726 ANXA8L1Q5VT79 327 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 DMRTA1Q5VZB9 504 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 SAXO2Q658L1 398 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 VWA1Q6PCB0 445 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 BHLHB9Q6PI77 547 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 P4HA3Q7Z4N8 544 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 SPATA19Q7Z5L4 167 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 MTERF4Q7Z6M4 381 aaKnown RBP12.97□□□□□ -0.33
HMGN3-202ENST00000344726 FNDC9Q8TBE3 224 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 MIPOL1Q8TD10 442 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 ADGRG7Q96K78 797 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 MARK4Q96L34 752 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 RNF145Q96MT1 663 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 POLDIP3Q9BY77 421 aaKnown RBP12.97□□□□□ -0.33
HMGN3-202ENST00000344726 OR51I1Q9H343 314 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 GALNT8Q9NY28 637 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 FOXD3Q9UJU5 478 aaPredicted RBP12.97□□□□□ -0.33
HMGN3-202ENST00000344726 ICAM5Q9UMF0 924 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 PCDHGB4Q9UN71 923 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 CARD8Q9Y2G2 431 aa12.97□□□□□ -0.33
HMGN3-202ENST00000344726 TRPC5OSA6NMA1 111 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 EFNA2O43921 213 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 SOX30O94993 753 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 OR12D1P0DN82 309 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 UQCRC2P22695 453 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 S100A3P33764 101 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 CDKN2CP42773 168 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 KIR2DL2P43627 348 aaPredicted RBP12.96□□□□□ -0.33
HMGN3-202ENST00000344726 ZNF41P51814 821 aaPredicted RBP12.96□□□□□ -0.33
HMGN3-202ENST00000344726 IST1P53990 364 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 EEFSECP57772 596 aaKnown RBP12.96□□□□□ -0.33
HMGN3-202ENST00000344726 TOMM34Q15785 309 aaPredicted RBP12.96□□□□□ -0.33
HMGN3-202ENST00000344726 ARHGAP11BQ3KRB8 267 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 TTMPQ5BVD1 217 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 PDZK1Q5T2W1 519 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 HEPHL1Q6MZM0 1159 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 TNFAIP8L2Q6P589 184 aaPredicted RBP12.96□□□□□ -0.33
HMGN3-202ENST00000344726 SPNS3Q6ZMD2 512 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 CHMP1BQ7LBR1 199 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 ZNF614Q8N883 585 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 ZNF527Q8NB42 609 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 FAM222BQ8WU58 562 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 ZNF75CPQ92670 426 aaPredicted RBP12.96□□□□□ -0.33
HMGN3-202ENST00000344726 RAB8BQ92930 207 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 ZBTB8AQ96BR9 441 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 STARD4Q96DR4 205 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 CCDC115Q96NT0 180 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 OR52B2Q96RD2 323 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 INPP5KQ9BT40 448 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 RBM24Q9BX46 236 aaKnown RBP12.96□□□□□ -0.33
HMGN3-202ENST00000344726 HOXD1Q9GZZ0 328 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 CLEC4MQ9H2X3 399 aaPredicted RBP12.96□□□□□ -0.33
HMGN3-202ENST00000344726 ACBD3Q9H3P7 528 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 RNF122Q9H9V4 155 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 HHATLQ9HCP6 504 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 BTNL2Q9UIR0 455 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 ZNF175Q9Y473 711 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 DTNAQ9Y4J8 743 aa12.96□□□□□ -0.33
HMGN3-202ENST00000344726 MED13LQ71F56 2210 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 A0A0J9YW62 118 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 PRAMEF27A3QJZ7 478 aa12.95□□□□□ -0.34
HMGN3-202ENST00000344726 TUBAL3A6NHL2 446 aa12.95□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms