RNA–Protein interactions for RNA: ENST00000343550.9

USF2-202, Transcript of upstream transcription factor 2, c-fos interacting, humanhuman

TSL 1 (best) BASIC

Gene USF2, Length 1,523 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF2-202ENST00000343550 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.3■□□□□ 0.25e-10■■□□□ 14.3
USF2-202ENST00000343550 RIPPLY2Q5TAB7 128 aa16.3■□□□□ 0.2
USF2-202ENST00000343550 DNAJC14Q6Y2X3 702 aaPredicted RBP16.3■□□□□ 0.2
USF2-202ENST00000343550 TMEM200AQ86VY9 491 aa16.3■□□□□ 0.2
USF2-202ENST00000343550 IFNEQ86WN2 208 aa16.3■□□□□ 0.2
USF2-202ENST00000343550 MISPQ8IVT2 679 aa16.3■□□□□ 0.2
USF2-202ENST00000343550 PNPT1Q8TCS8 783 aaKnown RBP16.3■□□□□ 0.2
USF2-202ENST00000343550 ROPN1LQ96C74 230 aa16.3■□□□□ 0.2
USF2-202ENST00000343550 C1GALT1C1Q96EU7 318 aa16.3■□□□□ 0.2
USF2-202ENST00000343550 WDYHV1Q96HA8 205 aa16.3■□□□□ 0.2
USF2-202ENST00000343550 NMUR2Q9GZQ4 415 aa16.3■□□□□ 0.2
USF2-202ENST00000343550 PRDM14Q9GZV8 571 aa16.3■□□□□ 0.2
USF2-202ENST00000343550 ZNF350Q9GZX5 532 aa16.3■□□□□ 0.2
USF2-202ENST00000343550 TPT1P8Q9HAU6 139 aa16.3■□□□□ 0.2
USF2-202ENST00000343550 KCNE5Q9UJ90 142 aa16.3■□□□□ 0.2
USF2-202ENST00000343550 MKLN1Q9UL63 735 aa16.3■□□□□ 0.2
USF2-202ENST00000343550 RPH3AQ9Y2J0 694 aaPredicted RBP16.3■□□□□ 0.2
USF2-202ENST00000343550 ANKRD17O75179 2603 aaKnown RBP16.3■□□□□ 0.2
USF2-202ENST00000343550 AHRRA9YTQ3 701 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 NR5A2O00482 541 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 GMFGO60234 142 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 CHMP24386 653 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 ARFIP2P53365 341 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 B3GALT5-AS1P59052 145 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 FUT5Q11128 374 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 SF3A3Q12874 501 aaKnown RBP eCLIP16.29■□□□□ 0.22e-11■■■■■ 52.2
USF2-202ENST00000343550 GANABQ14697 944 aaKnown RBP16.29■□□□□ 0.2
USF2-202ENST00000343550 ZNF141Q15928 474 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 PAGE3Q5JUK9 113 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 MTERF4Q7Z6M4 381 aaKnown RBP16.29■□□□□ 0.2
USF2-202ENST00000343550 ULK2Q8IYT8 1036 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 PHOSPHO1Q8TCT1 267 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 SAP130Q9H0E3 1048 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 SLAMF8Q9P0V8 285 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 DTNAQ9Y4J8 743 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 A0A096LPI6 279 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 A0A1W2PP18 115 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 DYNC1I1O14576 645 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 UGT2B17O75795 530 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 CPN1P15169 458 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 HOXB9P17482 250 aaPredicted RBP16.29■□□□□ 0.2
USF2-202ENST00000343550 HK1P19367 917 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 GCKP35557 465 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 MAGEA8P43361 318 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 STARP49675 285 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 ANXA11P50995 505 aaKnown RBP16.29■□□□□ 0.2
USF2-202ENST00000343550 GLYR1Q49A26 553 aaPredicted RBP16.29■□□□□ 0.2
USF2-202ENST00000343550 TYW3Q6IPR3 259 aaKnown RBP16.29■□□□□ 0.2
USF2-202ENST00000343550 AAGABQ6PD74 315 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 ARSKQ6UWY0 536 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 PM20D2Q8IYS1 436 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 ZG16BQ96DA0 208 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 AURKBQ96GD4 344 aaPredicted RBP16.29■□□□□ 0.2
USF2-202ENST00000343550 POLE3Q9NRF9 147 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 LIPT1Q9Y234 373 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 L3MBTL1Q9Y468 752 aa16.29■□□□□ 0.2
USF2-202ENST00000343550 MED12Q93074 2177 aa16.28■□□□□ 0.2
USF2-202ENST00000343550 H3BNH8 94 aa16.28■□□□□ 0.2
USF2-202ENST00000343550 CLIC1O00299 241 aa16.28■□□□□ 0.2
USF2-202ENST00000343550 TCEA1P23193 301 aaKnown RBP16.28■□□□□ 0.2
USF2-202ENST00000343550 RNF144AP50876 292 aaPredicted RBP16.28■□□□□ 0.2
USF2-202ENST00000343550 SYPL1Q16563 259 aa16.28■□□□□ 0.2
USF2-202ENST00000343550 GPAT3Q53EU6 434 aa16.28■□□□□ 0.2
USF2-202ENST00000343550 PDZK1Q5T2W1 519 aa16.28■□□□□ 0.2
USF2-202ENST00000343550 LRIF1Q5T3J3 769 aa16.28■□□□□ 0.2
USF2-202ENST00000343550 ENPP6Q6UWR7 440 aa16.28■□□□□ 0.2
USF2-202ENST00000343550 SEM1Q6ZVN7 128 aa16.28■□□□□ 0.2
USF2-202ENST00000343550 B4GALNT2Q8NHY0 566 aa16.28■□□□□ 0.2
USF2-202ENST00000343550 SH3YL1Q96HL8 342 aaPredicted RBP16.28■□□□□ 0.2
USF2-202ENST00000343550 SFXN2Q96NB2 322 aa16.28■□□□□ 0.2
USF2-202ENST00000343550 TRNT1Q96Q11 434 aaKnown RBP16.28■□□□□ 0.2
USF2-202ENST00000343550 KLHDC3Q9BQ90 382 aa16.28■□□□□ 0.2
USF2-202ENST00000343550 SLC25A37Q9NYZ2 338 aa16.28■□□□□ 0.2
USF2-202ENST00000343550 CAMK2AQ9UQM7 478 aa16.28■□□□□ 0.2
USF2-202ENST00000343550 WDR45Q9Y484 360 aa16.28■□□□□ 0.2
USF2-202ENST00000343550 HSPB2A8KAH6 182 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 HCRTR2O43614 444 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 H6PDO95479 791 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 ETFAP13804 333 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 CRATP43155 626 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 LHX2P50458 406 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 ZNF117Q03924 483 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 CHRNEQ04844 493 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 HSPB2Q16082 182 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 MAPK14Q16539 360 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 TMEM44Q2T9K0 475 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 CBLN3Q6UW01 205 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 FRRS1Q6ZNA5 592 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 MSRB3Q8IXL7 192 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 ANKFN1Q8N957 763 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 OR5M1Q8NGP8 315 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 KLHL14Q9P2G3 628 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 ICAM5Q9UMF0 924 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 CARD8Q9Y2G2 431 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 ZNF337Q9Y3M9 751 aa16.27■□□□□ 0.2
USF2-202ENST00000343550 SPG11Q96JI7 2443 aa16.27■□□□□ 0.19
USF2-202ENST00000343550 CENPVL1A0A0U1RR11 272 aa16.26■□□□□ 0.19
USF2-202ENST00000343550 SERINC4A6NH21 518 aa16.26■□□□□ 0.19
USF2-202ENST00000343550 GTPBP1O00178 669 aaKnown RBP16.26■□□□□ 0.19
USF2-202ENST00000343550 SYT5O00445 386 aa16.26■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms