RNA–Protein interactions for RNA: ENST00000343366.8

CDHR4-201, Transcript of cadherin related family member 4, humanhuman

TSL 1 (best) BASIC

Gene CDHR4, Length 1,188 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-201ENST00000343366 DEPPQ9NTK1 212 aa17.07■□□□□ 0.32
CDHR4-201ENST00000343366 NTNG1Q9Y2I2 539 aa17.07■□□□□ 0.32
CDHR4-201ENST00000343366 MRPS18CQ9Y3D5 142 aaKnown RBP17.07■□□□□ 0.32
CDHR4-201ENST00000343366 MTORP42345 2549 aa17.07■□□□□ 0.32
CDHR4-201ENST00000343366 NINQ8N4C6 2090 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 ELOVL7A1L3X0 281 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 ANKUB1A6NFN9 424 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 SERINC4A6NH21 518 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 GTPBP1O00178 669 aaKnown RBP17.06■□□□□ 0.32
CDHR4-201ENST00000343366 EBAG9O00559 213 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 GMNNO75496 209 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 NUDT7P0C024 238 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 T-ENOLP0DO92 83 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 NID1P14543 1247 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 DNASE1L1P49184 302 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 SUMO3P55854 103 aaPredicted RBP17.06■□□□□ 0.32
CDHR4-201ENST00000343366 FOXO1Q12778 655 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 BNIP1Q12981 228 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 FGFBP1Q14512 234 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 MAPK11Q15759 364 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 DNAL1Q4LDG9 190 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 EIPR1Q53HC9 387 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 PDZK1Q5T2W1 519 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 C6orf89Q6UWU4 347 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 ZAR1Q86SH2 424 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 PTOV1Q86YD1 416 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 ZZZ3Q8IYH5 903 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 DEFB107AQ8IZN7 70 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 PHOSPHO1Q8TCT1 267 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 WDR60Q8WVS4 1066 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 SLC35B4Q969S0 331 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 TTTY12Q9BZ98 90 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 RUBCNLQ9H714 662 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 CMTM6Q9NX76 183 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 TUBA8Q9NY65 449 aaPredicted RBP17.06■□□□□ 0.32
CDHR4-201ENST00000343366 ADA2Q9NZK5 511 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 PRPF19Q9UMS4 504 aaKnown RBP17.06■□□□□ 0.32
CDHR4-201ENST00000343366 CCDC168Q8NDH2 2452 aa17.06■□□□□ 0.32
CDHR4-201ENST00000343366 ZNF264O43296 627 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 HNRNPRO43390 633 aaKnown RBP17.05■□□□□ 0.32
CDHR4-201ENST00000343366 SCO2O43819 266 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 GLSO94925 669 aaPredicted RBP17.05■□□□□ 0.32
CDHR4-201ENST00000343366 HSD17B1P14061 328 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 ZNF24P17028 368 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 KCNJ10P78508 379 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 SLC25A3Q00325 362 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 ALDH6A1Q02252 535 aaKnown RBP17.05■□□□□ 0.32
CDHR4-201ENST00000343366 LIPEQ05469 1076 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 ELOAQ14241 798 aaKnown RBP17.05■□□□□ 0.32
CDHR4-201ENST00000343366 KRTCAP3Q53RY4 240 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 BICRALQ6AI39 1079 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 DESI1Q6ICB0 168 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 CCDC80Q76M96 950 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 MARCH3Q86UD3 253 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 ZNF440Q8IYI8 595 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 MICU2Q8IYU8 434 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 FAM109AQ8N4B1 249 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 CISD2Q8N5K1 135 aaKnown RBP17.05■□□□□ 0.32
CDHR4-201ENST00000343366 ZNF614Q8N883 585 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 RBM15BQ8NDT2 890 aaKnown RBP17.05■□□□□ 0.32
CDHR4-201ENST00000343366 OR4K17Q8NGC6 315 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 OR52P1PQ8NH57 321 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 DUSP19Q8WTR2 217 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 MARVELD3Q96A59 401 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 JSRP1Q96MG2 331 aaPredicted RBP17.05■□□□□ 0.32
CDHR4-201ENST00000343366 KCTD14Q9BQ13 255 aaPredicted RBP17.05■□□□□ 0.32
CDHR4-201ENST00000343366 GALNT9Q9HCQ5 603 aa17.05■□□□□ 0.32
CDHR4-201ENST00000343366 GPC6Q9Y625 555 aaPredicted RBP17.05■□□□□ 0.32
CDHR4-201ENST00000343366 NME4O00746 187 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 TFECO14948 347 aaPredicted RBP17.04■□□□□ 0.32
CDHR4-201ENST00000343366 CSTAP01040 98 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 PABPC4LP0CB38 370 aaKnown RBP17.04■□□□□ 0.32
CDHR4-201ENST00000343366 UBL4AP11441 157 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 HTR1EP28566 365 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 PRKAR1BP31321 381 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 CPOXP36551 454 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 PCBP3P57721 371 aaKnown RBP17.04■□□□□ 0.32
CDHR4-201ENST00000343366 PPIAP62937 165 aaKnown RBP17.04■□□□□ 0.32
CDHR4-201ENST00000343366 RNF220Q5VTB9 566 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 GRAMD2AQ8IUY3 354 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 C10orf111Q8N326 155 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 FAR1Q8WVX9 515 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 CDRT15Q96T59 188 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 TRIM8Q9BZR9 551 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 LAT2Q9GZY6 243 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 EXOSC3Q9NQT5 275 aaKnown RBP17.04■□□□□ 0.32
CDHR4-201ENST00000343366 TAS2R1Q9NYW7 299 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 FLRT3Q9NZU0 649 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 SEC14L3Q9UDX4 400 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 C15orf41Q9Y2V0 281 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 SVILO95425 2214 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 MED13LQ71F56 2210 aa17.04■□□□□ 0.32
CDHR4-201ENST00000343366 A0A087WZY1 265 aa17.03■□□□□ 0.32
CDHR4-201ENST00000343366 FAM47E-STBD1D6RA91 191 aa17.03■□□□□ 0.32
CDHR4-201ENST00000343366 GSTA4O15217 222 aa17.03■□□□□ 0.32
CDHR4-201ENST00000343366 GYG2O15488 501 aa17.03■□□□□ 0.32
CDHR4-201ENST00000343366 UQCRBP14927 111 aa17.03■□□□□ 0.32
CDHR4-201ENST00000343366 GCKP35557 465 aa17.03■□□□□ 0.32
CDHR4-201ENST00000343366 SLC6A8P48029 635 aa17.03■□□□□ 0.32
CDHR4-201ENST00000343366 P2RX1P51575 399 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms