RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 CTXN1P60606 82 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 COX20Q5RI15 118 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 ANKRD34AQ69YU3 496 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 B3GLCTQ6Y288 498 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 OLIG3Q7RTU3 272 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 OR2A12Q8NGT7 310 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 OLIG1Q8TAK6 271 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 MS4A4EQ96PG1 132 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 LMF1Q96S06 567 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 SLC25A18Q9H1K4 315 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 PDE7BQ9NP56 450 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 EPHA6Q9UF33 1036 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 COL22A1Q8NFW1 1626 aaPredicted RBP7.58□□□□□ -1.2
UBE4B-202ENST00000343090 TRAV27A0A087WT01 109 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 KRBOX1C9JBD0 128 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 RDH16O75452 317 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 PRKRAO75569 313 aaKnown RBP7.58□□□□□ -1.2
UBE4B-202ENST00000343090 B3GALT4O96024 378 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 CD6P30203 668 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 GRK5P34947 590 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 P2RY2P41231 377 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 PRLHRP49683 370 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 ACTA2P62736 377 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 ACTG2P63267 376 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 NUMA1Q14980 2115 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 DUSP7Q16829 419 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 FAM76BQ5HYJ3 339 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 CST9Q5W186 159 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 PTRH1Q86Y79 214 aaKnown RBP7.58□□□□□ -1.2
UBE4B-202ENST00000343090 SERPINA12Q8IW75 414 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 TMEFF1Q8IYR6 380 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 BOLLQ8N9W6 283 aaKnown RBP7.58□□□□□ -1.2
UBE4B-202ENST00000343090 OR4F15Q8NGB8 312 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 OR2L2Q8NH16 312 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 OR5W2Q8NH69 310 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 TRMT2BQ96GJ1 504 aaKnown RBP7.58□□□□□ -1.2
UBE4B-202ENST00000343090 WASH6PQ9NQA3 447 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 PRMT8Q9NR22 394 aaPredicted RBP7.58□□□□□ -1.2
UBE4B-202ENST00000343090 ASB1Q9Y576 335 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 RAB19A4D1S5 217 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 HIDE1A8MVS5 230 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 ARHGAP33O14559 1287 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 IFNA21P01568 189 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 MTHFD2P13995 350 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 FBLP22087 321 aaKnown RBP7.58□□□□□ -1.2
UBE4B-202ENST00000343090 IMPA1P29218 277 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 SOX9P48436 509 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 IRF4Q15306 451 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 DUSP6Q16828 381 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 CDNFQ49AH0 187 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 BEST4Q8NFU0 473 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 ZNF419Q96HQ0 510 aaPredicted RBP7.58□□□□□ -1.2
UBE4B-202ENST00000343090 ZFYVE21Q9BQ24 234 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 APOOQ9BUR5 198 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 IFT22Q9H7X7 185 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 RBFOX1Q9NWB1 397 aaKnown RBP7.58□□□□□ -1.2
UBE4B-202ENST00000343090 NUBP2Q9Y5Y2 271 aa7.58□□□□□ -1.2
UBE4B-202ENST00000343090 SLC16A6O15403 523 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 TIMP1P01033 207 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 HTR2AP28223 471 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 ARRB1P49407 418 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-202ENST00000343090 SLC7A9P82251 487 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 SLC14A2Q15849 920 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 KCTD18Q6PI47 426 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-202ENST00000343090 IL20RBQ6UXL0 311 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 BCDIN3DQ7Z5W3 292 aaKnown RBP7.57□□□□□ -1.2
UBE4B-202ENST00000343090 KCTD20Q7Z5Y7 419 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 RTN4RL1Q86UN2 441 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-202ENST00000343090 ZNF584Q8IVC4 421 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 OR5T2Q8NGG2 359 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 OR13C3Q8NGS6 347 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 ZDHHC12Q96GR4 267 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 PINK1Q9BXM7 581 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 OR6C2Q9NZP2 312 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 IER3IP1Q9Y5U9 82 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 PIAS3Q9Y6X2 628 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 hCG_1807616A0A1W2PRN6 198 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 PTPN6P29350 595 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 FGL1Q08830 312 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 POU4F2Q12837 409 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 SQSTM1Q13501 440 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 NXNL2Q5VZ03 156 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 GAREM2Q75VX8 874 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 ENTHD1Q8IYW4 607 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 DNAJC22Q8N4W6 341 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 TMEM239Q8WW34 195 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 METTL2AQ96IZ6 378 aaKnown RBP7.57□□□□□ -1.2
UBE4B-202ENST00000343090 THAP7Q9BT49 309 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-202ENST00000343090 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.57□□□□□ -1.2
UBE4B-202ENST00000343090 ZNF701Q9NV72 531 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-202ENST00000343090 DZANK1Q9NVP4 752 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 PSORS1C1Q9UIG5 152 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 DKKL1Q9UK85 242 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 A0A0A6YYC8 382 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-202ENST00000343090 I3L1I5 382 aaPredicted RBP7.57□□□□□ -1.2
UBE4B-202ENST00000343090 PRKYO43930 277 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 KCNK5O95279 499 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 SFTPBP07988 381 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 UCHL1P09936 223 aa7.57□□□□□ -1.2
UBE4B-202ENST00000343090 RAB3AP20336 220 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms