RNA–Protein interactions for RNA: ENST00000342415.5

SNRNP48-201, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP48, Length 4,173 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-201ENST00000342415 CTSAP10619 480 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 CD6P30203 668 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 PRDX1Q06830 199 aaKnown RBP11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 NLRP8Q86W28 1048 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 GPALPP1Q8IXQ4 340 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 KLHDC8BQ8IXV7 354 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 DEFB119Q8N690 84 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 CREB3L4Q8TEY5 395 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 GHSRQ92847 366 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 LAMP5Q9UJQ1 280 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 TMPRSS11EQ9UL52 423 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 LCMT2O60294 686 aaKnown RBP11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 FZD7O75084 574 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 TFP02787 698 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 CD2P06729 351 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 MMP12P39900 470 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 OR3A3P47888 321 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 ERVFC1P60507 584 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 RAE1P78406 368 aaKnown RBP11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 CDK3Q00526 305 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 TSPAN31Q12999 210 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 HNRNPA1L2Q32P51 320 aaKnown RBP11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 PUS10Q3MIT2 529 aaKnown RBP11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 POGLUT1Q8NBL1 392 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 OR6F1Q8NGZ6 308 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 THAP4Q8WY91 577 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 GCDHQ92947 438 aaPredicted RBP11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 CREB3L1Q96BA8 519 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 SLC22A18Q96BI1 424 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 ZG16BQ96DA0 208 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 CHFRQ96EP1 664 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 S100A13Q99584 98 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 PINK1Q9BXM7 581 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 GON7Q9BXV9 100 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 SEMA4GQ9NTN9 838 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 SLC23A2Q9UGH3 650 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 TRBV5-3A0A0A0MS03 114 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 SLC9B1P1A6NJY1 282 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 RBBP9O75884 186 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 SPDEFO95238 335 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 ELK1P19419 428 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 RPS5P46782 204 aaKnown RBP11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 TAS2R43P59537 309 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 CRMP1Q14194 572 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 FAM26DQ5JW98 314 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 ELP2Q6IA86 826 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 PYHIN1Q6K0P9 492 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 CCDC190Q86UF4 302 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 CLDN22Q8N7P3 220 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 OR5J2Q8NH18 312 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 SRRQ9GZT4 340 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 TRPV4Q9HBA0 871 aa11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 DNMT3BQ9UBC3 853 aaKnown RBP11.63□□□□□ -0.55
SNRNP48-201ENST00000342415 CENPFP49454 3210 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 TACSTD2P09758 323 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 OR10A3P58181 314 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 SCRN3Q0VDG4 424 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 PRAMEF17Q5VTA0 474 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 PLCZ1Q86YW0 608 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 NRSN1Q8IZ57 195 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 FAM109AQ8N4B1 249 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 OR13C5Q8NGS8 318 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 SLC6A15Q9H2J7 730 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 Q9N2J8 555 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 SCN3AQ9NY46 2000 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 GXYLT2A0PJZ3 443 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 KIAA0355O15063 1070 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 VNN2O95498 520 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 TEAD1P28347 426 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 GDI2P50395 445 aaKnown RBP11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 PDX1P52945 283 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 KLHL26Q53HC5 615 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 AMER3Q8N944 861 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 VN1R2Q8NFZ6 395 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 ACOT12Q8WYK0 555 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 ZNF471Q9BX82 626 aaPredicted RBP11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 CHST2Q9Y4C5 530 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 DDOSTP39656 456 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 ERVK-25P63136 954 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 CST6Q15828 149 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 AMZ1Q400G9 498 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 ALKAL2Q6UX46 152 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 REM2Q8IYK8 340 aaPredicted RBP11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 GPR135Q8IZ08 494 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 NAXEQ8NCW5 288 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 OR2L5Q8NG80 312 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 OR10H5Q8NGA6 315 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 GIMAP1Q8WWP7 306 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 PDCD1LG2Q9BQ51 273 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 CHST8Q9H2A9 424 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 C11orf49Q9H6J7 331 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 FKBP14Q9NWM8 211 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 OR51B4Q9Y5P0 310 aa11.62□□□□□ -0.55
SNRNP48-201ENST00000342415 A8MVJ9 347 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 ECDO95905 644 aaPredicted RBP11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 FXYD6P3P58550 94 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 ERV3-1Q14264 604 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 C3orf38Q5JPI3 329 aa11.61□□□□□ -0.55
SNRNP48-201ENST00000342415 MRPL2Q5T653 305 aaKnown RBP11.61□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.1 ms