RNA–Protein interactions for RNA: ENST00000340660.10

ATXN3-201, Transcript of ataxin 3, humanhuman

TSL 1 (best) BASIC

Gene ATXN3, Length 1,205 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-201ENST00000340660 ARL13AQ5H913 290 aaPredicted RBP9.45□□□□□ -0.9
ATXN3-201ENST00000340660 CDK20Q8IZL9 346 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 GPATCH11Q8N954 259 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 WDR31Q8NA23 367 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 NEK11Q8NG66 645 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 OR2V1Q8NHB1 315 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 ADAMTS15Q8TE58 950 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 RNF138Q8WVD3 245 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 RAB39BQ96DA2 213 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 REXO4Q9GZR2 422 aaKnown RBP9.45□□□□□ -0.9
ATXN3-201ENST00000340660 PRDM13Q9H4Q3 707 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 HAUS4Q9H6D7 363 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 MED11Q9P086 117 aa9.45□□□□□ -0.9
ATXN3-201ENST00000340660 A0A0J9YW62 118 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 CST8O60676 142 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 NDUFS3O75489 264 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 RP2O75695 350 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 JTBO76095 146 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 YES1P07947 543 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 CT62P0C5K7 136 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 MPC1LP0DKB6 136 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 SLC1A3P43003 542 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 PRAMEP78395 509 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 ZNF239Q16600 458 aaKnown RBP9.44□□□□□ -0.9
ATXN3-201ENST00000340660 TCP11X2Q5H9J9 407 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 AVPI1Q5T686 147 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 MFSD7Q6UXD7 560 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 ZNF620Q6ZNG0 422 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 Q6ZSV7 163 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 C7orf57Q8NEG2 295 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 Q8NFD4 153 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 CCT6BQ92526 530 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 LPGAT1Q92604 370 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 TMCO6Q96DC7 493 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 AIF1LQ9BQI0 150 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 OR10A5Q9H207 317 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 COPS7BQ9H9Q2 264 aaPredicted RBP9.44□□□□□ -0.9
ATXN3-201ENST00000340660 DYNLRB1Q9NP97 96 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 MMP26Q9NRE1 261 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 SEC14L4Q9UDX3 406 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 ADAM29Q9UKF5 820 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 AUP1Q9Y679 476 aa9.44□□□□□ -0.9
ATXN3-201ENST00000340660 WASHC1A8K0Z3 465 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 HACD1B0YJ81 288 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 E9PQ18 207 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 IL33O95760 270 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 F7P08709 466 aaPredicted RBP9.43□□□□□ -0.9
ATXN3-201ENST00000340660 CPN2P22792 545 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 RPL15P61313 204 aaKnown RBP9.43□□□□□ -0.9
ATXN3-201ENST00000340660 BIKQ13323 160 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 HERPUD1Q15011 391 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 RNPS1Q15287 305 aaKnown RBP9.43□□□□□ -0.9
ATXN3-201ENST00000340660 SLC9B1Q4ZJI4 515 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 LGSNQ5TDP6 509 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 HBMQ6B0K9 141 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 PAQR3Q6TCH7 311 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 CNTN4Q8IWV2 1026 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 C11orf44Q8N8P7 122 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 OR56A3Q8NH54 315 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 RDH5Q92781 318 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 P3H4Q92791 437 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 C1GALT1C1Q96EU7 318 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 PELI2Q9HAT8 420 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 PPP4R1LQ9P1A2 415 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 RIMKLBQ9ULI2 386 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 PLA2G2DQ9UNK4 145 aa9.43□□□□□ -0.9
ATXN3-201ENST00000340660 SF3B6Q9Y3B4 125 aaKnown RBP9.43□□□□□ -0.9
ATXN3-201ENST00000340660 MUC4Q99102 2169 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 A0A1W2PS29 197 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 CIB4A0PJX0 185 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 OR6C70A6NIJ9 312 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 ZFPL1O95159 310 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 GUCA1CO95843 209 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 TIA1P31483 386 aaKnown RBP eCLIP9.42□□□□□ -0.9
ATXN3-201ENST00000340660 SESN2P58004 480 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-201ENST00000340660 FAM205BPQ63HN1 556 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 E4F1Q66K89 784 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-201ENST00000340660 Q6ZTK2 550 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 LRRC70Q7Z2Q7 622 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 TMPRSS11BQ86T26 416 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 SAMD14Q8IZD0 417 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-201ENST00000340660 RNF10Q8N5U6 811 aaKnown RBP9.42□□□□□ -0.9
ATXN3-201ENST00000340660 ZSCAN4Q8NAM6 433 aaPredicted RBP9.42□□□□□ -0.9
ATXN3-201ENST00000340660 SYT8Q8NBV8 401 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 OSTF1Q92882 214 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 NPAS1Q99742 590 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 PELOQ9BRX2 385 aaKnown RBP9.42□□□□□ -0.9
ATXN3-201ENST00000340660 ITPAQ9BY32 194 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 SRXN1Q9BYN0 137 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 BRINP2Q9C0B6 783 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 MMP28Q9H239 520 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 C16orf95Q9H693 158 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 RPF2Q9H7B2 306 aaKnown RBP9.42□□□□□ -0.9
ATXN3-201ENST00000340660 CXorf36Q9H7Y0 433 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 CXorf21Q9HAI6 301 aa9.42□□□□□ -0.9
ATXN3-201ENST00000340660 PPIAL4EA0A075B759 164 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 PPIAL4CA0A0B4J2A2 164 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 PPIAL4DF5H284 164 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 H3BMM5 538 aa9.41□□□□□ -0.9
ATXN3-201ENST00000340660 PLATP00750 562 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 83.7 ms