RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 OR5AK3PQ8NH89 298 aa12.03□□□□□ -0.48
SIRPB3P-201ENST00000340424 FAM222BQ8WU58 562 aa12.03□□□□□ -0.48
SIRPB3P-201ENST00000340424 ARL8AQ96BM9 186 aa12.03□□□□□ -0.48
SIRPB3P-201ENST00000340424 OTUB1Q96FW1 271 aaPredicted RBP12.03□□□□□ -0.48
SIRPB3P-201ENST00000340424 SLC35G5Q96KT7 338 aa12.03□□□□□ -0.48
SIRPB3P-201ENST00000340424 ATP6V1G3Q96LB4 118 aa12.03□□□□□ -0.48
SIRPB3P-201ENST00000340424 ZBTB18Q99592 522 aa12.03□□□□□ -0.48
SIRPB3P-201ENST00000340424 FBXO34Q9NWN3 711 aa12.03□□□□□ -0.48
SIRPB3P-201ENST00000340424 BTNL2Q9UIR0 455 aa12.03□□□□□ -0.48
SIRPB3P-201ENST00000340424 PACSIN3Q9UKS6 424 aa12.03□□□□□ -0.48
SIRPB3P-201ENST00000340424 VDAC3Q9Y277 283 aa12.03□□□□□ -0.48
SIRPB3P-201ENST00000340424 PDZD2O15018 2839 aa12.02□□□□□ -0.48
SIRPB3P-201ENST00000340424 EEF1E1-BLOC1S5C9J1V9 151 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 NPIPB9F8W1W9 429 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 EEF1E1O43324 174 aaKnown RBP12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 STX11O75558 287 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 IDO1P14902 403 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 TCEA1P23193 301 aaKnown RBP12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 ME2P23368 584 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 ELK4P28324 431 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 ADH6P28332 368 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 PLPPR5Q32ZL2 321 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 ARHGAP11BQ3KRB8 267 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 FAM174BQ3ZCQ3 159 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 KLHL26Q53HC5 615 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 SPANXN4Q5MJ08 99 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 ATAD3BQ5T9A4 648 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 AP1ARQ63HQ0 302 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 UBQLNLQ8IYU4 475 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 TOR1AIP2Q8NFQ8 470 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 PIWIL2Q8TC59 973 aaKnown RBP12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 PHOSPHO1Q8TCT1 267 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 NUDT8Q8WV74 236 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 ZBTB9Q96C00 473 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 INTS12Q96CB8 462 aaKnown RBP12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 MAELQ96JY0 434 aaKnown RBP12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 CCDC115Q96NT0 180 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 SDF2Q99470 211 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 POLE3Q9NRF9 147 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 MED17Q9NVC6 651 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 DTNAQ9Y4J8 743 aa12.02□□□□□ -0.49
SIRPB3P-201ENST00000340424 OTOGQ6ZRI0 2925 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 MED12Q93074 2177 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 A0A1W2PNV4 684 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 GJE1A6NN92 205 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 MSTNO14793 375 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 SEC14L5O43304 696 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 IL6P05231 212 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 PGRP06401 933 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 ALDOCP09972 364 aaKnown RBP12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 EPHA3P29320 983 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 MAGEA8P43361 318 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 KHKP50053 298 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 ANXA11P50995 505 aaKnown RBP12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 P2RX1P51575 399 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 RAC1P63000 192 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 GNGT1P63211 74 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 CD226Q15762 336 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 GSTA3Q16772 222 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 PDSS1Q5T2R2 415 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 ESPNLQ6ZVH7 1005 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 C16orf62Q7Z3J2 963 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 YTHDF3Q7Z739 585 aaKnown RBP12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 GATSQ8NAP1 163 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 OR5D16Q8NGK9 328 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 NEURL3Q96EH8 262 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 PINK1Q9BXM7 581 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 RNF122Q9H9V4 155 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 MARCOQ9UEW3 520 aaPredicted RBP12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 GPR45Q9Y5Y3 372 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 GPC6Q9Y625 555 aaPredicted RBP12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 KIAA1549Q9HCM3 1950 aa12.01□□□□□ -0.49
SIRPB3P-201ENST00000340424 NUP214P35658 2090 aaPredicted RBP12□□□□□ -0.49
SIRPB3P-201ENST00000340424 TNFSF12-TNFSF13A0A0A6YY99 330 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 TUBAL3A6NHL2 446 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 GTPBP1O00178 669 aaKnown RBP12□□□□□ -0.49
SIRPB3P-201ENST00000340424 EBAG9O00559 213 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 ADAMDEC1O15204 470 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 EIF4E2O60573 245 aaKnown RBP12□□□□□ -0.49
SIRPB3P-201ENST00000340424 TNFSF13O75888 250 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 CPSF4O95639 269 aaKnown RBP12□□□□□ -0.49
SIRPB3P-201ENST00000340424 TGM6O95932 706 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 LINGO3P0C6S8 592 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 KITP10721 976 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 PSMA4P25789 261 aaKnown RBP12□□□□□ -0.49
SIRPB3P-201ENST00000340424 CHI3L1P36222 383 aaPredicted RBP12□□□□□ -0.49
SIRPB3P-201ENST00000340424 CPA2P48052 419 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 SUCLG1P53597 346 aaKnown RBP12□□□□□ -0.49
SIRPB3P-201ENST00000340424 CLDN15P56746 228 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 CLDN20P56880 219 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 PHC1P78364 1004 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 ZNF117Q03924 483 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 FOXF2Q12947 444 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 PON3Q15166 354 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 ZNF141Q15928 474 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 SGCBQ16585 318 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 PDCD4Q53EL6 469 aaKnown RBP12□□□□□ -0.49
SIRPB3P-201ENST00000340424 SAXO2Q658L1 398 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 HEPHL1Q6MZM0 1159 aa12□□□□□ -0.49
SIRPB3P-201ENST00000340424 GGNQ86UU5 652 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms