RNA–Protein interactions for RNA: ENST00000339307.8

ITGA4-202, Transcript of integrin subunit alpha 4, humanhuman

TSL 1 (best) BASIC

Gene ITGA4, Length 1,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA4-202ENST00000339307 NPIPA7E9PJI5 369 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 GTPBP1O00178 669 aaKnown RBP17.4■□□□□ 0.38
ITGA4-202ENST00000339307 NPIPA8P0DM63 369 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 LAMP1P11279 417 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 LCN1P31025 176 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 CCT3P49368 545 aaKnown RBP17.4■□□□□ 0.38
ITGA4-202ENST00000339307 CARD18P57730 90 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 GUSBP1Q15486 140 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 UGT3A2Q3SY77 523 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 GTF2IRD2BQ6EKJ0 949 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 C22orf34Q6ZV56 151 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 ESPNLQ6ZVH7 1005 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 GTF2IRD2Q86UP8 949 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 TRABD2AQ86V40 505 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 WFDC8Q8IUA0 241 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 FNDC5Q8NAU1 212 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 ROBO4Q8WZ75 1007 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 PIGUQ9H490 435 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 SIRT3Q9NTG7 399 aaPredicted RBP17.4■□□□□ 0.38
ITGA4-202ENST00000339307 ATAD3AQ9NVI7 634 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 ATP6V1HQ9UI12 483 aa17.4■□□□□ 0.38
ITGA4-202ENST00000339307 H3BNH8 94 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 SS18L1O75177 396 aaPredicted RBP17.39■□□□□ 0.38
ITGA4-202ENST00000339307 HSPA4LO95757 839 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 PTGR1Q14914 329 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 CTU2Q2VPK5 515 aaKnown RBP17.39■□□□□ 0.38
ITGA4-202ENST00000339307 IL23RQ5VWK5 629 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 CDC73Q6P1J9 531 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 KRTAP1-3Q8IUG1 177 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 RFWD2Q8NHY2 731 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 POC1BQ8TC44 478 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 TCP10LQ8TDR4 215 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 NUDT8Q8WV74 236 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 OR5P2Q8WZ92 322 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 KLHL15Q96M94 604 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 STACQ99469 402 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 PRPF18Q99633 342 aaKnown RBP17.39■□□□□ 0.38
ITGA4-202ENST00000339307 KLHDC3Q9BQ90 382 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 ACTRT3Q9BYD9 372 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 ROPN1BQ9BZX4 212 aaPredicted RBP17.39■□□□□ 0.38
ITGA4-202ENST00000339307 ROPN1Q9HAT0 212 aaPredicted RBP17.39■□□□□ 0.38
ITGA4-202ENST00000339307 GLRX2Q9NS18 164 aa17.39■□□□□ 0.38
ITGA4-202ENST00000339307 A0A1W2PQD3 144 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 SMAD7O15105 426 aaKnown RBP17.38■□□□□ 0.37
ITGA4-202ENST00000339307 ADAMDEC1O15204 470 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 C6orf47O95873 294 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 IL11P20809 199 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 SOAT1P35610 550 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 ZNF117Q03924 483 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 FOXF1Q12946 379 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 MLC1Q15049 377 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 LSM12Q3MHD2 195 aaKnown RBP17.38■□□□□ 0.37
ITGA4-202ENST00000339307 C20orf204Q6ZNR8 217 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 BEND4Q6ZU67 534 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 YTHDF3Q7Z739 585 aaKnown RBP17.38■□□□□ 0.37
ITGA4-202ENST00000339307 RIBC1Q8N443 379 aaPredicted RBP17.38■□□□□ 0.37
ITGA4-202ENST00000339307 KRTCAP2Q8N6L1 136 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 TMCO5AQ8N6Q1 288 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 OR56A1Q8NGH5 318 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 OR5AK3PQ8NH89 298 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 TUBGCP3Q96CW5 907 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 ADGRG7Q96K78 797 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 Q96MF0 132 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 PIP5K1AQ99755 562 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 HOXD1Q9GZZ0 328 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 TIGARQ9NQ88 270 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 DUSP22Q9NRW4 184 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 MKS1Q9NXB0 559 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 CARD8Q9Y2G2 431 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP17.38■□□□□ 0.37
ITGA4-202ENST00000339307 C7orf72A4D263 438 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 PPP3CBP16298 524 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 PSMA4P25789 261 aaKnown RBP17.38■□□□□ 0.37
ITGA4-202ENST00000339307 EIF1P41567 113 aaKnown RBP17.38■□□□□ 0.37
ITGA4-202ENST00000339307 BEX5Q5H9J7 111 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 TMEM201Q5SNT2 666 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 DCST2Q5T1A1 773 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 STAC2Q6ZMT1 411 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 LRRC75A-AS1Q8N1F1 130 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 FBXO27Q8NI29 283 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 PPP1R14CQ8TAE6 165 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 C3orf30Q96M34 536 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 TMEM109Q9BVC6 243 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 ACTR6Q9GZN1 396 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 CXorf36Q9H7Y0 433 aa17.38■□□□□ 0.37
ITGA4-202ENST00000339307 FLNAP21333 2647 aaKnown RBP17.37■□□□□ 0.37
ITGA4-202ENST00000339307 H7C1Q1 480 aa17.37■□□□□ 0.37
ITGA4-202ENST00000339307 THBDP07204 575 aa17.37■□□□□ 0.37
ITGA4-202ENST00000339307 KRT16P08779 473 aa17.37■□□□□ 0.37
ITGA4-202ENST00000339307 LINGO3P0C6S8 592 aa17.37■□□□□ 0.37
ITGA4-202ENST00000339307 PABPC4LP0CB38 370 aaKnown RBP17.37■□□□□ 0.37
ITGA4-202ENST00000339307 SHC1P29353 583 aa17.37■□□□□ 0.37
ITGA4-202ENST00000339307 P2RX1P51575 399 aa17.37■□□□□ 0.37
ITGA4-202ENST00000339307 CCR4P51679 360 aa17.37■□□□□ 0.37
ITGA4-202ENST00000339307 PGS1Q32NB8 556 aa17.37■□□□□ 0.37
ITGA4-202ENST00000339307 NDUFAF6Q330K2 333 aa17.37■□□□□ 0.37
ITGA4-202ENST00000339307 TMEM176BQ3YBM2 270 aaPredicted RBP17.37■□□□□ 0.37
ITGA4-202ENST00000339307 C6orf136Q5SQH8 315 aa17.37■□□□□ 0.37
ITGA4-202ENST00000339307 CBLN3Q6UW01 205 aa17.37■□□□□ 0.37
ITGA4-202ENST00000339307 PLEKHM3Q6ZWE6 761 aa17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms