RNA–Protein interactions for RNA: ENST00000339255.2

NIPAL3-202, Transcript of NIPA like domain containing 3, humanhuman

TSL 5 BASIC

Gene NIPAL3, Length 1,676 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3-202ENST00000339255 TSEN54Q7Z6J9 526 aaKnown RBP13.31□□□□□ -0.28
NIPAL3-202ENST00000339255 NODALQ96S42 347 aa13.31□□□□□ -0.28
NIPAL3-202ENST00000339255 UTP23Q9BRU9 249 aaKnown RBP13.31□□□□□ -0.28
NIPAL3-202ENST00000339255 LAT2Q9GZY6 243 aa13.31□□□□□ -0.28
NIPAL3-202ENST00000339255 REEP1Q9H902 201 aa13.31□□□□□ -0.28
NIPAL3-202ENST00000339255 SH2D2AQ9NP31 389 aa13.31□□□□□ -0.28
NIPAL3-202ENST00000339255 NKX1-2Q9UD57 310 aaPredicted RBP13.31□□□□□ -0.28
NIPAL3-202ENST00000339255 KCNMB2Q9Y691 235 aa13.31□□□□□ -0.28
NIPAL3-202ENST00000339255 CHD8Q9HCK8 2581 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 CELSR3Q9NYQ7 3312 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 FAAHO00519 579 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 CASQ2O14958 399 aaPredicted RBP13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 FRS3O43559 492 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 SCO2O43819 266 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 CAPNS1P04632 268 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 ZNF136P52737 540 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 NPTX1Q15818 432 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 DEFB109BQ30KR1 87 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 DESI1Q6ICB0 168 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 LRRC69Q6ZNQ3 347 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 MARCH3Q86UD3 253 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 LACC1Q8IV20 430 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 OFCC1Q8IZS5 231 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 OR4D11Q8NGI4 311 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 OSBPL11Q9BXB4 747 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 VCX3BQ9H321 246 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 CPNE5Q9HCH3 593 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 WIF1Q9Y5W5 379 aa13.3□□□□□ -0.28
NIPAL3-202ENST00000339255 ASPMQ8IZT6 3477 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 HCRTR2O43614 444 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 E2F6O75461 281 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 THRBP10828 461 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 MSX1P28360 303 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 CASP3P42574 277 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 SESN3P58005 492 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 OC90Q02509 493 aaPredicted RBP13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 ZNF117Q03924 483 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 TLE3Q04726 772 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 MFAP5Q13361 173 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 COLEC12Q5KU26 742 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 SWT1Q5T5J6 900 aaKnown RBP13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 HMBOX1Q6NT76 420 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 ZNF613Q6PF04 617 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 PLEKHM3Q6ZWE6 761 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 AMIGO2Q86SJ2 522 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 ZNF605Q86T29 641 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 RBM45Q8IUH3 476 aaKnown RBP13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 SVOPLQ8N434 492 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 TMCO5AQ8N6Q1 288 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 LSMEM1Q8N8F7 131 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 GATSQ8NAP1 163 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 PHF10Q8WUB8 498 aaKnown RBP13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 DHRS1Q96LJ7 313 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 FRMD6Q96NE9 622 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 EPYCQ99645 322 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 MCHR1Q99705 422 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 WFDC6Q9BQY6 131 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 TRIM2Q9C040 744 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 ANKRD19PQ9H560 264 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 TIMMDC1Q9NPL8 285 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 CARD8Q9Y2G2 431 aa13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 SAMHD1Q9Y3Z3 626 aaKnown RBP13.29□□□□□ -0.28
NIPAL3-202ENST00000339255 IGLV3-32A0A0A0MS00 114 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 A0A1W2PRQ8 180 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 BCAS1O75363 584 aaPredicted RBP13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 CEACAM4O75871 244 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 SNX4O95219 450 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 OR5F1O95221 314 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 P04436 131 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 LINGO3P0C6S8 592 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 GKN3PP0CG01 181 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 RRM2P31350 389 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 RNF144AP50876 292 aaPredicted RBP13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 ARHGDIAP52565 204 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 GAS1P54826 345 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 TMPRSS3P57727 454 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 TAS2R41P59536 307 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 COPZ1P61923 177 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 SPIBQ01892 262 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 EPS8Q12929 822 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 DGCR6Q14129 220 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 TRIP10Q15642 601 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 PIK3C3Q8NEB9 887 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 CATSPER1Q8NEC5 780 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 ADAMTS16Q8TE57 1224 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 SDCCAG3Q96C92 435 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 NRBF2Q96F24 287 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 DCBLD2Q96PD2 775 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 FNDC11Q9BVV2 318 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 OSBPL10Q9BXB5 764 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 ANGPTL4Q9BY76 406 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 SEMA6AQ9H2E6 1030 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 NMNAT1Q9HAN9 279 aaPredicted RBP13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 NTN4Q9HB63 628 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 C8orf4Q9NR00 106 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 SACM1LQ9NTJ5 587 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 PPP4R1LQ9P1A2 415 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 LRFN1Q9P244 771 aa13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 CNOT11Q9UKZ1 510 aaKnown RBP13.28□□□□□ -0.28
NIPAL3-202ENST00000339255 A4GNTQ9UNA3 340 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms