RNA–Protein interactions for RNA: ENST00000338962.8

LRP1-202, Transcript of LDL receptor related protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRP1, Length 2,169 nt, Biotype protein coding, Subcellular localisation Exosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP1-202ENST00000338962 PRAMEF2O60811 474 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 SULT1C4O75897 302 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 KCNK2O95069 426 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 THY1P04216 161 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 GKN3PP0CG01 181 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 CSRP1P21291 193 aaKnown RBP10.26□□□□□ -0.77
LRP1-202ENST00000338962 S100A1P23297 94 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 SSTR4P31391 388 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 ARL4DP49703 201 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 CDK5Q00535 292 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 PSG6Q00889 435 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 ZNF91Q05481 1191 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 IRF3Q14653 427 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 OCLNQ16625 522 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 TRIM16LQ309B1 348 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 ACSM5Q6NUN0 579 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 RASSF6Q6ZTQ3 369 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 ZNF367Q7RTV3 350 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 FAM26EQ8N5C1 309 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 TMCO5AQ8N6Q1 288 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 ZNF614Q8N883 585 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 SCAIQ8N9R8 606 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 OR51Q1Q8NH59 317 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 WDR36Q8NI36 951 aaKnown RBP10.26□□□□□ -0.77
LRP1-202ENST00000338962 TMEM255BQ8WV15 326 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 RPL3LQ92901 407 aaKnown RBP10.26□□□□□ -0.77
LRP1-202ENST00000338962 LGALS12Q96DT0 336 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 LRR1Q96L50 414 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 SLC38A2Q96QD8 506 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 LMF2Q9BU23 707 aaKnown RBP10.26□□□□□ -0.77
LRP1-202ENST00000338962 CNPPD1Q9BV87 410 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 TEX12Q9BXU0 123 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 POLR2J2Q9GZM3 115 aaKnown RBP10.26□□□□□ -0.77
LRP1-202ENST00000338962 FOLH1BQ9HBA9 442 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 KCNE5Q9UJ90 142 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 SPEGQ15772 3267 aa10.26□□□□□ -0.77
LRP1-202ENST00000338962 ADAMTS9Q9P2N4 1935 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 FAM186AA6NE01 2351 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 TRAPPC13A5PLN9 417 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 H0YIG0 161 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 NTN1O95631 604 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 GP1BAP07359 652 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 DBTP11182 482 aaKnown RBP10.25□□□□□ -0.77
LRP1-202ENST00000338962 PRG2P13727 222 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 MAOAP21397 527 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 S1PR1P21453 382 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 GPR4P46093 362 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 EMDP50402 254 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 RNF144AP50876 292 aaPredicted RBP10.25□□□□□ -0.77
LRP1-202ENST00000338962 HSD17B7P56937 341 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 OR1D5P58170 312 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 BTG2P78543 158 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 IGLV3-21P80748 117 aaPredicted RBP10.25□□□□□ -0.77
LRP1-202ENST00000338962 SQSTM1Q13501 440 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 ZNF267Q14586 743 aaPredicted RBP10.25□□□□□ -0.77
LRP1-202ENST00000338962 ANKDD1AQ495B1 522 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 SYT14P1Q58G82 188 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 ARMCX4Q5H9R4 360 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 CLEC12AQ5QGZ9 265 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 GUSBP11Q6P575 273 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 SLCO6A1Q86UG4 719 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 SLC15A4Q8N697 577 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 HOXB13Q92826 284 aaPredicted RBP10.25□□□□□ -0.77
LRP1-202ENST00000338962 OSTF1Q92882 214 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 ZHX1-C8orf76Q96EF9 292 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 TMEM80Q96HE8 168 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 DSN1Q9H410 356 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 TESQ9UGI8 421 aaKnown RBP10.25□□□□□ -0.77
LRP1-202ENST00000338962 PTPRZ1P23471 2315 aaPredicted RBP10.25□□□□□ -0.77
LRP1-202ENST00000338962 FITM1A5D6W6 292 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 SNTNA6NMZ2 147 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 HRKO00198 91 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 DUX1O43812 170 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 OR2B3O76000 313 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 IFNA16P05015 189 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 ATXN8OSP0DMR3 200 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 MYF5P13349 255 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 STAT5AP42229 794 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 RGS6P49758 472 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 SEPHS1P49903 392 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 PGDP52209 483 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 ATP1A4Q13733 1029 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 KCNAB1Q14722 419 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 DGUOKQ16854 277 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 AMZ1Q400G9 498 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 SLC25A30Q5SVS4 291 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 BCDIN3DQ7Z5W3 292 aaKnown RBP10.25□□□□□ -0.77
LRP1-202ENST00000338962 PLXDC1Q8IUK5 500 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 VSTM2LQ96N03 204 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 ZNF578Q96N58 590 aaPredicted RBP10.25□□□□□ -0.77
LRP1-202ENST00000338962 MGLLQ99685 303 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 TSSK6Q9BXA6 273 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 SPRTNQ9H040 489 aaPredicted RBP10.25□□□□□ -0.77
LRP1-202ENST00000338962 RALGAPA1Q6GYQ0 2036 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 GVINP1Q7Z2Y8 2422 aa10.25□□□□□ -0.77
LRP1-202ENST00000338962 IGHV1OR21-1A0A087WYE8 117 aa10.24□□□□□ -0.77
LRP1-202ENST00000338962 OR2W5A6NFC9 320 aa10.24□□□□□ -0.77
LRP1-202ENST00000338962 FMO6PO60774 539 aa10.24□□□□□ -0.77
LRP1-202ENST00000338962 RPLP0P05388 317 aaKnown RBP10.24□□□□□ -0.77
LRP1-202ENST00000338962 GADD45AP24522 165 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms