RNA–Protein interactions for RNA: ENST00000338850.5

RTN3-201, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 493 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-201ENST00000338850 DNAJA4Q8WW22 397 aaPredicted RBP10.03□□□□□ -0.8
RTN3-201ENST00000338850 SLC7A6Q92536 515 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 TM9SF4Q92544 642 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 ELP4Q96EB1 424 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 ST6GAL2Q96JF0 529 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 C12orf66Q96MD2 445 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 FERD3LQ96RJ6 166 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 KCNS3Q9BQ31 491 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 C17orf62Q9BQA9 187 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 ZNF649Q9BS31 505 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 ACAT2Q9BWD1 397 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 MFRPQ9BY79 579 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 CACYBPQ9HB71 228 aaKnown RBP10.03□□□□□ -0.8
RTN3-201ENST00000338850 SLC6A20Q9NP91 592 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 POLE3Q9NRF9 147 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 SNTG1Q9NSN8 517 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 ERVK13-1Q9NX77 482 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 NLGN3Q9NZ94 848 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 OR6C2Q9NZP2 312 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 PTGFRNQ9P2B2 879 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 RABL2AQ9UBK7 228 aaPredicted RBP10.03□□□□□ -0.8
RTN3-201ENST00000338850 DKK4Q9UBT3 224 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 POU2F3Q9UKI9 436 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 RABL2BQ9UNT1 228 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 CA5BQ9Y2D0 317 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 CAB39Q9Y376 341 aaPredicted RBP10.03□□□□□ -0.8
RTN3-201ENST00000338850 GPSM3Q9Y4H4 160 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 PCDHGA1Q9Y5H4 931 aa10.03□□□□□ -0.8
RTN3-201ENST00000338850 SPIN1Q9Y657 262 aaPredicted RBP10.03□□□□□ -0.8
RTN3-201ENST00000338850 GOLGA4Q13439 2230 aaKnown RBP10.03□□□□□ -0.8
RTN3-201ENST00000338850 COL5A1P20908 1838 aaPredicted RBP10.03□□□□□ -0.8
RTN3-201ENST00000338850 A0A1W2PQU0 124 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 FEZF1A0PJY2 475 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 MEIOCA2RUB1 952 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 TRABD2BA6NFA1 517 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 PRAMEF26H0Y7S4 382 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 AP3D1O14617 1153 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 RGS5O15539 181 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 ERI3O43414 337 aaKnown RBP10.02□□□□□ -0.81
RTN3-201ENST00000338850 SCO2O43819 266 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 RNGTTO60942 597 aaKnown RBP10.02□□□□□ -0.81
RTN3-201ENST00000338850 PCCBP05166 539 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 IGFBP1P08833 259 aaPredicted RBP10.02□□□□□ -0.81
RTN3-201ENST00000338850 CSF3P09919 207 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 MTNR1BP49286 362 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 RNF144AP50876 292 aaPredicted RBP10.02□□□□□ -0.81
RTN3-201ENST00000338850 CDH11P55287 796 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 KIAA1024LP59773 190 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 RPS21P63220 83 aaKnown RBP10.02□□□□□ -0.81
RTN3-201ENST00000338850 TNFRSF17Q02223 184 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 HNRNPA0Q13151 305 aaKnown RBP10.02□□□□□ -0.81
RTN3-201ENST00000338850 DUSP8Q13202 625 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 LASP1Q14847 261 aaKnown RBP10.02□□□□□ -0.81
RTN3-201ENST00000338850 IRF4Q15306 451 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 GPR19Q15760 415 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 BAK1Q16611 211 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 ZSWIM7Q19AV6 140 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 ARHGAP11BQ3KRB8 267 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 FLYWCH1Q4VC44 716 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 ATAD3CQ5T2N8 411 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 PDZK1Q5T2W1 519 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 LCN1P1Q5VSP4 162 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 MZT2BQ6NZ67 158 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 FAM131AQ6UXB0 335 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 WDR53Q7Z5U6 358 aaPredicted RBP10.02□□□□□ -0.81
RTN3-201ENST00000338850 PAQR7Q86WK9 346 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 TMPRSS12Q86WS5 348 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 IQCF1Q8N6M8 205 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 TMEM145Q8NBT3 493 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 NUP43Q8NFH3 380 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 OR5D16Q8NGK9 328 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 OR8D4Q8NGM9 314 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 SLC2A12Q8TD20 617 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 RSC1A1Q92681 617 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 C10orf90Q96M02 699 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 GPA33Q99795 319 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 WFDC6Q9BQY6 131 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 PLA2G12AQ9BZM1 189 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 KCNN2Q9H2S1 579 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 SLA2Q9H6Q3 261 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 PPP1R3EQ9H7J1 279 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 MTHFD2LQ9H903 347 aaPredicted RBP10.02□□□□□ -0.81
RTN3-201ENST00000338850 ABCB9Q9NP78 766 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 C14orf105Q9NVL8 296 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 C5AR2Q9P296 337 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 BAIAP2Q9UQB8 552 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 TMEM5Q9Y2B1 443 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 RAXQ9Y2V3 346 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 N6AMT1Q9Y5N5 214 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 ZNF780BQ9Y6R6 833 aa10.02□□□□□ -0.81
RTN3-201ENST00000338850 LRP4O75096 1905 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 TP53BP1Q12888 1972 aaPredicted RBP10.01□□□□□ -0.81
RTN3-201ENST00000338850 A0A087WV62 115 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 A0A1W2PQL4 384 aaPredicted RBP10.01□□□□□ -0.81
RTN3-201ENST00000338850 CCDC182A6NF36 153 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 FABP12A6NFH5 140 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 IGLON5A6NGN9 336 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 CENPXA8MT69 81 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 PLD2O14939 933 aa10.01□□□□□ -0.81
RTN3-201ENST00000338850 SLC31A1O15431 190 aa10.01□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms