RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 NUP205Q92621 2012 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 OR2M4Q96R27 311 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 TRPV4Q9HBA0 871 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 CLDND1Q9NY35 253 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 ATXN1LP0C7T5 689 aaKnown RBP15.11■□□□□ 0.01
NPHP3-201ENST00000337331 ZNF20P17024 532 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 PDZK1IP1Q13113 114 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 VEZF1Q14119 521 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 GRHL2Q6ISB3 625 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 METAP1DQ6UB28 335 aaPredicted RBP15.11■□□□□ 0.01
NPHP3-201ENST00000337331 LINC00597Q9H2U6 94 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 TMEM45AQ9NWC5 275 aa15.11■□□□□ 0.01
NPHP3-201ENST00000337331 POM121BA6NF01 834 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 VIPR2P41587 438 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 EIF1AXP47813 144 aaKnown RBP15.1■□□□□ 0.01
NPHP3-201ENST00000337331 NTHL1P78549 312 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 LIN28BQ6ZN17 250 aaKnown RBP eCLIP15.1■□□□□ 0.01
NPHP3-201ENST00000337331 CBLL1Q75N03 491 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 ASPGQ86U10 573 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 GTPBP8Q8N3Z3 284 aaPredicted RBP15.1■□□□□ 0.01
NPHP3-201ENST00000337331 PXT1Q8NFP0 134 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 PINK1Q9BXM7 581 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 OR2S2Q9NQN1 319 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 PCDHGA2Q9Y5H1 932 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 A0A1W2PQU0 124 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 PLA2G10O15496 165 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 ADAM12O43184 909 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 LATO43561 262 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 SNAPC5O75971 98 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 NDUFV2P19404 249 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 GBX1Q14549 363 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 PLA2G15Q8NCC3 412 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 TSTD1Q8NFU3 115 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 OR56B4Q8NH76 319 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 TINAGL1Q9GZM7 467 aaPredicted RBP15.1■□□□□ 0.01
NPHP3-201ENST00000337331 ST6GALNAC1Q9NSC7 600 aaPredicted RBP15.1■□□□□ 0.01
NPHP3-201ENST00000337331 ELF5Q9UKW6 265 aaPredicted RBP15.1■□□□□ 0.01
NPHP3-201ENST00000337331 EXO1Q9UQ84 846 aaKnown RBP15.1■□□□□ 0.01
NPHP3-201ENST00000337331 TGM5O43548 720 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 GPR37L1O60883 481 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 AHSA1O95433 338 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 ADRA1AP35348 466 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 SIM1P81133 766 aaPredicted RBP15.1■□□□□ 0.01
NPHP3-201ENST00000337331 SEC23BQ15437 767 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 ZNF79Q15937 498 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 MORN1Q5T089 497 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 MANEALQ5VSG8 457 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 MLIPQ5VWP3 458 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 MCEMP1Q8IX19 187 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 CMIPQ8IY22 773 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 SLC44A3Q8N4M1 653 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 POGLUT1Q8NBL1 392 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 OR6N2Q8NGY6 317 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 OPALINQ96PE5 141 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 RPH3AQ9Y2J0 694 aaPredicted RBP15.1■□□□□ 0.01
NPHP3-201ENST00000337331 MRPS17Q9Y2R5 130 aaKnown RBP15.1■□□□□ 0.01
NPHP3-201ENST00000337331 GOSR2O14653 212 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 CSTAP01040 98 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 THEGLP0DJG4 465 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 PPP3CBP16298 524 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 CCR7P32248 378 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 RAB13P51153 203 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 IRF5Q13568 498 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 PEA15Q15121 130 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 ITPRIPL2Q3MIP1 535 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 FIGNL1Q6PIW4 674 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 TMPRSS9Q7Z410 1059 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 OR5M3Q8NGP4 307 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 ADAMTS14Q8WXS8 1223 aa15.1■□□□□ 0.01
NPHP3-201ENST00000337331 LRIT2A6NDA9 550 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 AGPAT2O15120 278 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 SNAPINO95295 136 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 DRD2P14416 443 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 SLC6A9P48067 706 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 HOXA1P49639 335 aaPredicted RBP15.09■□□□□ 0.01
NPHP3-201ENST00000337331 SIAH3Q8IW03 269 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 BEST3Q8N1M1 668 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 UCN3Q969E3 161 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 NEIL2Q969S2 332 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 TOE1Q96GM8 510 aaKnown RBP15.09■□□□□ 0.01
NPHP3-201ENST00000337331 CPPED1Q9BRF8 314 aaPredicted RBP15.09■□□□□ 0.01
NPHP3-201ENST00000337331 GRHPRQ9UBQ7 328 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 KIF25Q9UIL4 384 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 BTNL2Q9UIR0 455 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 LAMP5Q9UJQ1 280 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 NOP16Q9Y3C1 178 aaKnown RBP15.09■□□□□ 0.01
NPHP3-201ENST00000337331 V9GYH0 126 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 ZNF726A6NNF4 738 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 M0R3H8 397 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 OSMP13725 252 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 VEGFCP49767 419 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 AIMP2Q13155 320 aaKnown RBP15.09■□□□□ 0.01
NPHP3-201ENST00000337331 OTUD1Q5VV17 481 aaPredicted RBP15.09■□□□□ 0.01
NPHP3-201ENST00000337331 SLC29A4Q7RTT9 530 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 KLHDC8AQ8IYD2 350 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 PTP4A1Q93096 173 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 NT5C3BQ969T7 300 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 DNAJA3Q96EY1 480 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 CXorf58Q96LI9 332 aa15.09■□□□□ 0.01
NPHP3-201ENST00000337331 ACTL8Q9H568 366 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms