RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 A0A1W2PPV9 198 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 DAPL1A0PJW8 107 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 CASC3O15234 703 aaKnown RBP15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 SSX5O60225 188 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 BLVRAP53004 296 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 MAB21L1Q13394 359 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 CDC73Q6P1J9 531 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 OR52L1Q8NGH7 329 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 RBPMSQ93062 196 aaKnown RBP15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 SLC41A3Q96GZ6 507 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 DPH1Q9BZG8 443 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 C6orf106Q9H6K1 298 aaPredicted RBP15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 PHPT1Q9NRX4 125 aaPredicted RBP15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 SLC7A7Q9UM01 511 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 TRAV6A0A075B6T7 132 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 A0A0A6YYD5 115 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 DVL2O14641 736 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 SLC31A1O15431 190 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 GKN3PP0CG01 181 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 ATP5A1P25705 553 aaKnown RBP15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 PDX1P52945 283 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 CXXC5Q7LFL8 322 aaKnown RBP15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 SPRED2Q7Z698 418 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 DNAJC5GQ8N7S2 189 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 SAMD12Q8N8I0 201 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 KCT2Q8NC54 265 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 OR4Q3Q8NH05 313 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 RSPRY1Q96DX4 576 aa15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 PAWRQ96IZ0 340 aaKnown RBP15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 ZNF768Q9H5H4 540 aaKnown RBP15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 ISG20L2Q9H9L3 353 aaKnown RBP15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 RBFOX1Q9NWB1 397 aaKnown RBP15.41■□□□□ 0.06
CDC42EP4-201ENST00000335793 STK25O00506 426 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 RNGTTO60942 597 aaKnown RBP15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 FUT5Q11128 374 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 EXOSC2Q13868 293 aaKnown RBP15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 C21orf62-AS1Q17RA5 79 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 CORO6Q6QEF8 472 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 VITQ6UXI7 678 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 RDH10Q8IZV5 341 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 OR52E1Q8NGJ3 308 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 MS4A6EQ96DS6 147 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 SLC38A1Q9H2H9 487 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 PRKAG2Q9UGJ0 569 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 ACSL5Q9ULC5 683 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 SPATA2Q9UM82 520 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 INSL6Q9Y581 213 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 TRBV23-1A0A0A0MS06 115 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 ZNF860A6NHJ4 632 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 SYPP08247 313 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 NDUFV2P19404 249 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 SIM1P81133 766 aaPredicted RBP15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 TNK1Q13470 666 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 ZNF273Q14593 569 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 ABHD17CQ6PCB6 329 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 SMAP2Q8WU79 429 aaPredicted RBP15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 ACOT11Q8WXI4 607 aaPredicted RBP15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 CDS1Q92903 461 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 KLHL15Q96M94 604 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 ZFP3Q96NJ6 502 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 TTYH1Q9H313 450 aaPredicted RBP15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 FGF20Q9NP95 211 aaPredicted RBP15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 EDARQ9UNE0 448 aa15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 PPIEQ9UNP9 301 aaKnown RBP15.4■□□□□ 0.06
CDC42EP4-201ENST00000335793 NPIPA5A0A0B4J1W7 369 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 TRDV1A0A1B0GX56 115 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 NPIPA7E9PJI5 369 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 GMDSO60547 372 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 PTP4A3O75365 173 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 NPIPA8P0DM63 369 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 ACVR1BP36896 505 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 NUP62P37198 522 aaPredicted RBP15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 ADAM15Q13444 863 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 OR14C36Q8NHC7 312 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 ELP4Q96EB1 424 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 IFT27Q9BW83 186 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 CLEC4MQ9H2X3 399 aaPredicted RBP15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 BCL2L10Q9HD36 194 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 HINT3Q9NQE9 182 aaKnown RBP15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 PAK6Q9NQU5 681 aaPredicted RBP15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 WBP1LQ9NX94 342 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 SPHK1Q9NYA1 384 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 CALML5Q9NZT1 146 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 ADAM29Q9UKF5 820 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 HCN1O60741 890 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 SCRN3Q0VDG4 424 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 PGGHGQ32M88 737 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 TMEM35AQ53FP2 167 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 ZNF628Q5EBL2 1059 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 FAM27D1Q5T7N8 215 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 GJD3Q8N144 294 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 C9orf62Q8N4C0 152 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 ACBD7Q8N6N7 88 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 OR51A7Q8NH64 312 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 ALPK3Q96L96 1907 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 IGKV1-8A0A0C4DH67 115 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 LINC00862A6NCI5 91 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 J3QLW9 94 aa15.39■□□□□ 0.05
CDC42EP4-201ENST00000335793 ZNF19P17023 458 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms