RNA–Protein interactions for RNA: ENST00000334218.9

CDC42BPA-201, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5 BASIC

Gene CDC42BPA, Length 10,134 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-201ENST00000334218 BRAT1Q6PJG6 821 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 DND1Q8IYX4 353 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 CFAP52Q8N1V2 620 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 SVIPQ8NHG7 77 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 DNASE2BQ8WZ79 361 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 PHYHIPLQ96FC7 376 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 PKP2Q99959 881 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 RHBGQ9H310 441 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 ASTN1O14525 1302 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLX4Q8IY92 1834 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 POM121BA6NF01 834 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLC16A7O60669 478 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 WDR1O75083 606 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 HIST1H1CP16403 213 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 GNG4P50150 75 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 AMMECR1LQ6DCA0 310 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZFAND6Q6FIF0 208 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 LCLAT1Q6UWP7 414 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 KIAA1324Q6UXG2 1013 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 GPR142Q7Z601 462 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 C20orf196Q8IYI0 205 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 ADGRG2Q8IZP9 1017 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF676Q8N7Q3 588 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR52N1Q8NH53 320 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR51J1Q9H342 316 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 ADAP2Q9NPF8 381 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 DUS2Q9NX74 493 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF226Q9NYT6 803 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 ENTPD3O75355 529 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR12D1P0DN82 309 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 BPIFB3P59826 476 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 ARL16Q0P5N6 197 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 DPCR1Q3MIW9 517 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 GLYATL3Q5SZD4 288 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 Q6ZN92 141 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 C4orf33Q8N1A6 199 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 RHEBL1Q8TAI7 183 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 NT5C3BQ969T7 300 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 RBMXL1Q96E39 390 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 MFSD14AQ96MC6 490 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 PRRT1Q99946 306 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 APMAPQ9HDC9 416 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 PLLPQ9Y342 182 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 A0A1W2PR80 420 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 F5H5T6 163 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 TGFB1I1O43294 461 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 SUSD5O60279 629 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 CYP21A2P08686 494 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 RHCEP18577 417 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 ATP5A1P25705 553 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 IDH3AP50213 366 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 EDDM3AQ14507 147 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 DUSP7Q16829 419 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 ZNF783Q6ZMS7 281 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 LGI4Q8N135 537 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR52R1Q8NGF1 315 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR8J2Q8NGG1 315 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 PYURFQ96I23 114 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 PACRGQ96M98 296 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 SEMA6BQ9H3T3 888 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 TFR2Q9UP52 801 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 COX11Q9Y6N1 276 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 CACNA1SQ13698 1873 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 THADAQ6YHU6 1953 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 SERTM2A0A1B0GWG4 89 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 SLC9B1P1A6NJY1 282 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 SCELO95171 688 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 S1PR1P21453 382 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 MC5RP33032 325 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 UGT8Q16880 541 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 GGNBP1Q5YKI7 109 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 ENPP7Q6UWV6 458 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 CDHR3Q6ZTQ4 885 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 ASB5Q8WWX0 329 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 DVL3Q92997 716 aaPredicted RBP5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 APH1AQ96BI3 265 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 TBC1D20Q96BZ9 403 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 GMPR2Q9P2T1 348 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 OR2M5A3KFT3 312 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 B4DEV8 164 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 PRKRAO75569 313 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 EDN3P14138 238 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 NQO2P16083 231 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 CKS1BP61024 79 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 FSTL1Q12841 308 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 KCNAB2Q13303 367 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 RAB39AQ14964 217 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 PIP5KL1Q5T9C9 394 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 GCNT2Q8N0V5 402 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 CXorf40AQ8TE69 158 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 LIPHQ8WWY8 451 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 DBNDD2Q9BQY9 259 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 SHARPINQ9H0F6 387 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 ACTR8Q9H981 624 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 ENAMQ9NRM1 1142 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 TMEM235A6NFC5 223 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 CA12O43570 354 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 EDF1O60869 148 aaKnown RBP5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 VNN1O95497 513 aa5.75□□□□□ -1.49
CDC42BPA-201ENST00000334218 ERBB2P04626 1255 aa5.75□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 48.2 ms