RNA–Protein interactions for RNA: ENST00000333254.3

CCDC172-201, Transcript of coiled-coil domain containing 172, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC172, Length 1,699 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC172-201ENST00000333254 SPRYD4Q8WW59 207 aaPredicted RBP9.96□□□□□ -0.81
CCDC172-201ENST00000333254 KISS1RQ969F8 398 aaPredicted RBP9.96□□□□□ -0.81
CCDC172-201ENST00000333254 TMEM203Q969S6 136 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 TSACCQ96A04 125 aaPredicted RBP9.96□□□□□ -0.81
CCDC172-201ENST00000333254 SCN2AQ99250 2005 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 GSDMCQ9BYG8 508 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 PBX4Q9BYU1 374 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 TRIM2Q9C040 744 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 MIR1-1HGQ9H1L0 117 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 IGFLR1Q9H665 355 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 C8orf33Q9H7E9 229 aaPredicted RBP9.96□□□□□ -0.81
CCDC172-201ENST00000333254 NEK6Q9HC98 313 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 TRIM36Q9NQ86 728 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 TOR4AQ9NXH8 423 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 BABAM2Q9NXR7 383 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 CLDND1Q9NY35 253 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 KCNE5Q9UJ90 142 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 NTNG1Q9Y2I2 539 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 MED31Q9Y3C7 131 aa9.96□□□□□ -0.81
CCDC172-201ENST00000333254 CHD7Q9P2D1 2997 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 A0A0B4J2E0 115 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 A0A1B0GX12 115 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 MEIOCA2RUB1 952 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 OR6C74A6NCV1 312 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 CCDC182A6NF36 153 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 SOCS6O14544 535 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 LINC01565O15544 149 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 RNF13O43567 381 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 PLPP2O43688 288 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 PTP4A3O75365 173 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 APOL3O95236 402 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 RASGRP1O95267 797 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 CH25HO95992 272 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 TNFP01375 233 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 IGLV3-19P01714 112 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 IFI30P13284 250 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 EN2P19622 333 aaPredicted RBP9.96□□□□□ -0.82
CCDC172-201ENST00000333254 CELP19835 753 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 SLC2A5P22732 501 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 F8A1P23610 371 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 BMP8BP34820 402 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 HOXD12P35452 270 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 NUDT1P36639 197 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 CD79BP40259 229 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 MLLT3P42568 568 aaPredicted RBP9.96□□□□□ -0.82
CCDC172-201ENST00000333254 CCR5P51681 352 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 SNRPNP63162 240 aaKnown RBP9.96□□□□□ -0.82
CCDC172-201ENST00000333254 IGLV3-21P80748 117 aaPredicted RBP9.96□□□□□ -0.82
CCDC172-201ENST00000333254 HOXC5Q00444 222 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 ADAM15Q13444 863 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 ZNF791Q3KP31 576 aaPredicted RBP9.96□□□□□ -0.82
CCDC172-201ENST00000333254 SMARCD3Q6STE5 483 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 WDR88Q6ZMY6 472 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 TMEM91Q6ZNR0 172 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 SPATC1Q76KD6 591 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 BMP8AQ7Z5Y6 402 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 TPRA1Q86W33 373 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 MEX3DQ86XN8 651 aaKnown RBP9.96□□□□□ -0.82
CCDC172-201ENST00000333254 CMIPQ8IY22 773 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 ARHGEF39Q8N4T4 335 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 LSMEM1Q8N8F7 131 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 TEX19Q8NA77 164 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 BBS1Q8NFJ9 593 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 CCL4L1Q8NHW4 92 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 FAM3CQ92520 227 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 ST6GAL2Q96JF0 529 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 CCNL2Q96S94 520 aaPredicted RBP9.96□□□□□ -0.82
CCDC172-201ENST00000333254 PHOX2BQ99453 314 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 KCNJ15Q99712 375 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 MFRPQ9BY79 579 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 CERS4Q9HA82 394 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 TMEM27Q9HBJ8 222 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 ADAP2Q9NPF8 381 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 TIGARQ9NQ88 270 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 GPR27Q9NS67 375 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 EVA1BQ9NVM1 165 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 CPNE7Q9UBL6 633 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 POU2F3Q9UKI9 436 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 CSNK1G3Q9Y6M4 447 aa9.96□□□□□ -0.82
CCDC172-201ENST00000333254 LOC105369274A0A096LPK9 316 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 LOC102723532A0A0G2JNH3 316 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 CENPVL1A0A0U1RR11 272 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 FAM172BPA6NC97 362 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 C12orf71A8MTZ7 269 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 B4DXG7 233 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 PLA2G10O15496 165 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 NARSO43776 548 aaKnown RBP9.95□□□□□ -0.82
CCDC172-201ENST00000333254 MT-ND5P03915 603 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 CD1AP06126 327 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 PRG2P13727 222 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 MAKP20794 623 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 NT5EP21589 574 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 AZGP1P25311 298 aaKnown RBP9.95□□□□□ -0.82
CCDC172-201ENST00000333254 ATP6V1E1P36543 226 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 TGM4P49221 684 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 PSMD4P55036 377 aaKnown RBP9.95□□□□□ -0.82
CCDC172-201ENST00000333254 SKP1P63208 163 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 PLAURQ03405 335 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 RAB30Q15771 203 aa9.95□□□□□ -0.82
CCDC172-201ENST00000333254 ZNF800Q2TB10 664 aaPredicted RBP eCLIP9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms