RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 RLIMQ9NVW2 624 aa23.59■■□□□ 1.37
SMDT1-201ENST00000331479 SEC14L3Q9UDX4 400 aa23.59■■□□□ 1.37
SMDT1-201ENST00000331479 PACSIN3Q9UKS6 424 aa23.59■■□□□ 1.37
SMDT1-201ENST00000331479 ICAM5Q9UMF0 924 aa23.59■■□□□ 1.37
SMDT1-201ENST00000331479 ZNF443Q9Y2A4 671 aaPredicted RBP23.59■■□□□ 1.37
SMDT1-201ENST00000331479 AP3M1Q9Y2T2 418 aa23.59■■□□□ 1.37
SMDT1-201ENST00000331479 CHST2Q9Y4C5 530 aa23.59■■□□□ 1.37
SMDT1-201ENST00000331479 GPC6Q9Y625 555 aaPredicted RBP23.59■■□□□ 1.37
SMDT1-201ENST00000331479 SVILO95425 2214 aa23.59■■□□□ 1.37
SMDT1-201ENST00000331479 UBTFL6P0CB48 400 aaPredicted RBP23.58■■□□□ 1.37
SMDT1-201ENST00000331479 EDN3P14138 238 aa23.58■■□□□ 1.37
SMDT1-201ENST00000331479 DPP4P27487 766 aa23.58■■□□□ 1.37
SMDT1-201ENST00000331479 SKP2Q13309 424 aa23.58■■□□□ 1.37
SMDT1-201ENST00000331479 MRPL2Q5T653 305 aaKnown RBP23.58■■□□□ 1.37
SMDT1-201ENST00000331479 ARSKQ6UWY0 536 aa23.58■■□□□ 1.37
SMDT1-201ENST00000331479 ZNF836Q6ZNA1 936 aa23.58■■□□□ 1.37
SMDT1-201ENST00000331479 YRDCQ86U90 279 aaKnown RBP23.58■■□□□ 1.37
SMDT1-201ENST00000331479 FAM71CQ8NEG0 241 aa23.58■■□□□ 1.37
SMDT1-201ENST00000331479 C1GALT1C1Q96EU7 318 aa23.58■■□□□ 1.37
SMDT1-201ENST00000331479 SLC6A15Q9H2J7 730 aa23.58■■□□□ 1.37
SMDT1-201ENST00000331479 ACKR4Q9NPB9 350 aa23.58■■□□□ 1.37
SMDT1-201ENST00000331479 PLSCR2Q9NRY7 297 aa23.58■■□□□ 1.37
SMDT1-201ENST00000331479 ADA2Q9NZK5 511 aa23.58■■□□□ 1.37
SMDT1-201ENST00000331479 SLC35A3Q9Y2D2 325 aa23.58■■□□□ 1.37
SMDT1-201ENST00000331479 ZIC3O60481 467 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 CYP7B1O75881 506 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 IGHG3P01860 377 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 PABPC4LP0CB38 370 aaKnown RBP23.57■■□□□ 1.36
SMDT1-201ENST00000331479 TCEA1P23193 301 aaKnown RBP23.57■■□□□ 1.36
SMDT1-201ENST00000331479 MSX1P28360 303 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 SRD5A2P31213 254 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 GSK3BP49841 420 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 DSCR4P56555 118 aaPredicted RBP23.57■■□□□ 1.36
SMDT1-201ENST00000331479 EEF1A1P68104 462 aaKnown RBP23.57■■□□□ 1.36
SMDT1-201ENST00000331479 FOXK1P85037 733 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 KRTCAP3Q53RY4 240 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 WIPI1Q5MNZ9 446 aaPredicted RBP23.57■■□□□ 1.36
SMDT1-201ENST00000331479 SPPL2CQ8IUH8 684 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 DEFB107AQ8IZN7 70 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 CNOT9Q92600 299 aaKnown RBP23.57■■□□□ 1.36
SMDT1-201ENST00000331479 ALG2Q9H553 416 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 PTGES2Q9H7Z7 377 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 DKKL1Q9UK85 242 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 ZNF407Q9C0G0 2248 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 EIF4E2O60573 245 aaKnown RBP23.57■■□□□ 1.36
SMDT1-201ENST00000331479 THBS1P07996 1170 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 ENDOUP21128 410 aaKnown RBP23.57■■□□□ 1.36
SMDT1-201ENST00000331479 P2RX1P51575 399 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 EEFSECP57772 596 aaKnown RBP23.57■■□□□ 1.36
SMDT1-201ENST00000331479 LIN52Q52LA3 116 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 ZNF311Q5JNZ3 666 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 ERICH5Q6P6B1 374 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 C16orf89Q6UX73 402 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 TRILQ7L0X0 811 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 KRT73Q86Y46 540 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 SLC30A8Q8IWU4 369 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 CHERPQ8IWX8 916 aaKnown RBP23.57■■□□□ 1.36
SMDT1-201ENST00000331479 MICU2Q8IYU8 434 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 CLIP4Q8N3C7 705 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 ZNF524Q96C55 264 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 OR2B2Q9GZK3 357 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 LAT2Q9GZY6 243 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 HHATLQ9HCP6 504 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 TAS2R10Q9NYW0 307 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 IFT52Q9Y366 437 aa23.57■■□□□ 1.36
SMDT1-201ENST00000331479 ELOVL7A1L3X0 281 aa23.56■■□□□ 1.36
SMDT1-201ENST00000331479 LARS2Q15031 903 aaKnown RBP23.56■■□□□ 1.36
SMDT1-201ENST00000331479 C6orf89Q6UWU4 347 aa23.56■■□□□ 1.36
SMDT1-201ENST00000331479 FGD2Q7Z6J4 655 aa23.56■■□□□ 1.36
SMDT1-201ENST00000331479 ZNF605Q86T29 641 aa23.56■■□□□ 1.36
SMDT1-201ENST00000331479 CMIPQ8IY22 773 aa23.56■■□□□ 1.36
SMDT1-201ENST00000331479 TMCO5AQ8N6Q1 288 aa23.56■■□□□ 1.36
SMDT1-201ENST00000331479 RNF148Q8N7C7 305 aa23.56■■□□□ 1.36
SMDT1-201ENST00000331479 ZNF607Q96SK3 696 aa23.56■■□□□ 1.36
SMDT1-201ENST00000331479 CDRT15Q96T59 188 aa23.56■■□□□ 1.36
SMDT1-201ENST00000331479 LDAHQ9H6V9 325 aa23.56■■□□□ 1.36
SMDT1-201ENST00000331479 DNAJB12Q9NXW2 375 aaKnown RBP23.56■■□□□ 1.36
SMDT1-201ENST00000331479 ZNF232Q9UNY5 417 aa23.56■■□□□ 1.36
SMDT1-201ENST00000331479 VDAC3Q9Y277 283 aa23.56■■□□□ 1.36
SMDT1-201ENST00000331479 RPH3AQ9Y2J0 694 aaPredicted RBP23.56■■□□□ 1.36
SMDT1-201ENST00000331479 TRGV5A0A0B4J1U4 118 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 A0A1B0GTH9 108 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 CDHR4A6H8M9 788 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 PRORSD1PA6NEY8 169 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 M0QX08 132 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 ADAM11O75078 769 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 MFN2O95140 757 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 OPN1SWP03999 348 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 CRYBA2P53672 197 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 DMTNQ08495 405 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 VEZF1Q14119 521 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 RNF220Q5VTB9 566 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 GFRALQ6UXV0 394 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 COMTD1Q86VU5 262 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 GHDCQ8N2G8 530 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 ST6GALNAC3Q8NDV1 305 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 OR14L1PQ8NHC6 308 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 NPAS1Q99742 590 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 NDE1Q9NXR1 346 aa23.55■■□□□ 1.36
SMDT1-201ENST00000331479 SLC6A5Q9Y345 797 aa23.55■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms