RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 TRHRP34981 398 aaPredicted RBP15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 EMDP50402 254 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 ZNF155Q12901 538 aaPredicted RBP15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 DCST2Q5T1A1 773 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 C6orf52Q5T4I8 152 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 ZNF468Q5VIY5 522 aaPredicted RBP15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 KDM4DQ6B0I6 523 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 FRRS1Q6ZNA5 592 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 ZNF619Q8N2I2 560 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 OR14A16Q8NHC5 309 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 GPR151Q8TDV0 419 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 GIPC3Q8TF64 312 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 FBXL20Q96IG2 436 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 DHRS1Q96LJ7 313 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 ANKRD19PQ9H560 264 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 FOLH1BQ9HBA9 442 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 Q9N2J8 555 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 PNPLA3Q9NST1 481 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 STMN3Q9NZ72 180 aa15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 MRTO4Q9UKD2 239 aaKnown RBP15.12■□□□□ 0.01
PDLIM1-201ENST00000329399 AGAP5A6NIR3 686 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 SLC16A6O15403 523 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 GADD45GO95257 159 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 RPS4Y1P22090 263 aaKnown RBP15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 ADARB1P78563 741 aaKnown RBP15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 SPIBQ01892 262 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 CHRNEQ04844 493 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 ZNF267Q14586 743 aaPredicted RBP15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 INPP5JQ15735 1006 aaPredicted RBP15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 EXT1Q16394 746 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 MICAQ29983 383 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 LIN52Q52LA3 116 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 ACER2Q5QJU3 275 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 FAHD1Q6P587 224 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 TBPL2Q6SJ96 375 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 C16orf47Q6ZP98 133 aaPredicted RBP15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 TSEN54Q7Z6J9 526 aaKnown RBP15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 CISD2Q8N5K1 135 aaKnown RBP15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 OR52P1PQ8NH57 321 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 PHF10Q8WUB8 498 aaKnown RBP15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 VSTM2LQ96N03 204 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 OR10A5Q9H207 317 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 LIN28AQ9H9Z2 209 aaKnown RBP15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 ANKRD10Q9NXR5 420 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 PDP1Q9P0J1 537 aaPredicted RBP15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 TMCC3Q9ULS5 477 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 KCNE3Q9Y6H6 103 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 CLCA3PQ9Y6N3 262 aa15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 UTP20O75691 2785 aaKnown RBP15.11■□□□□ 0.01
PDLIM1-201ENST00000329399 OR6C76A6NM76 312 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 HRKO00198 91 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 KIAA0513O60268 411 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 ZIC2O95409 532 aaPredicted RBP15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 LYNP07948 512 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 IGFBP5P24593 272 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 GABRA3P34903 492 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 OR1E2P47887 323 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 LIMS1P48059 325 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 FOXK1P85037 733 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 CYP27C1Q4G0S4 372 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 RNF220Q5VTB9 566 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 TYW3Q6IPR3 259 aaKnown RBP15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 UGT2A3Q6UWM9 527 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 USP51Q70EK9 711 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 BEST3Q8N1M1 668 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 MORN4Q8NDC4 146 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 OR4C15Q8NGM1 316 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 THAP3Q8WTV1 239 aaPredicted RBP15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 HAS2Q92819 552 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 MIB2Q96AX9 1013 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 SNRNP40Q96DI7 357 aaKnown RBP15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 CNBD2Q96M20 576 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 ARHGDIGQ99819 225 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 HOXD1Q9GZZ0 328 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 CDCP1Q9H5V8 836 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 ZNF556Q9HAH1 456 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 RYDENQ9NUL5 291 aaKnown RBP15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 ACER3Q9NUN7 267 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 KIF17Q9P2E2 1029 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 PCDHGA10Q9Y5H3 936 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 HSPE1-MOB4S4R3N1 261 aa15.1■□□□□ 0.01
PDLIM1-201ENST00000329399 CPAMD8Q8IZJ3 1885 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 A0A1W2PRQ8 180 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 TMEM200CA6NKL6 621 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 C17orf105B2RV13 164 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 HS6ST1O60243 411 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 FMO6PO60774 539 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 WISP2O76076 250 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 DDAH2O95865 285 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 H1F0P07305 194 aaKnown RBP15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 IL7RP16871 459 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 PTGER1P34995 402 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 TNFSF10P50591 281 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 BLMHQ13867 455 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 DGCR6Q14129 220 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 EXOSC7Q15024 291 aaKnown RBP15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 TMEM179BQ7Z7N9 219 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 CMIPQ8IY22 773 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 TAGAPQ8N103 731 aa15.09■□□□□ 0.01
PDLIM1-201ENST00000329399 ZNF615Q8N8J6 731 aa15.09■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms