RNA–Protein interactions for RNA: ENST00000318801.8

SYNGR1-202, Transcript of synaptogyrin 1, humanhuman

TSL 1 (best) BASIC

Gene SYNGR1, Length 1,361 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGR1-202ENST00000318801 TNFAIP8L2Q6P589 184 aaPredicted RBP26.33■■□□□ 1.8
SYNGR1-202ENST00000318801 DCHS2Q6V1P9 2916 aa26.33■■□□□ 1.8
SYNGR1-202ENST00000318801 MAVSQ7Z434 540 aa26.33■■□□□ 1.8
SYNGR1-202ENST00000318801 OIT3Q8WWZ8 545 aa26.33■■□□□ 1.8
SYNGR1-202ENST00000318801 C14orf79Q96F83 325 aa26.33■■□□□ 1.8
SYNGR1-202ENST00000318801 TREX2Q9BQ50 279 aaPredicted RBP26.33■■□□□ 1.8
SYNGR1-202ENST00000318801 TRIM8Q9BZR9 551 aa26.33■■□□□ 1.8
SYNGR1-202ENST00000318801 TCF7L2Q9NQB0 619 aa26.33■■□□□ 1.8
SYNGR1-202ENST00000318801 MED17Q9NVC6 651 aa26.33■■□□□ 1.8
SYNGR1-202ENST00000318801 PAQR5Q9NXK6 330 aaPredicted RBP26.33■■□□□ 1.8
SYNGR1-202ENST00000318801 CLCF1Q9UBD9 225 aa26.33■■□□□ 1.8
SYNGR1-202ENST00000318801 C9JVG2 144 aa26.32■■□□□ 1.8
SYNGR1-202ENST00000318801 ANP32DO95626 131 aa26.32■■□□□ 1.8
SYNGR1-202ENST00000318801 KRT75O95678 551 aa26.32■■□□□ 1.8
SYNGR1-202ENST00000318801 CASP9P55211 416 aa26.32■■□□□ 1.8
SYNGR1-202ENST00000318801 CD226Q15762 336 aa26.32■■□□□ 1.8
SYNGR1-202ENST00000318801 TMEM44Q2T9K0 475 aa26.32■■□□□ 1.8
SYNGR1-202ENST00000318801 INTS12Q96CB8 462 aaKnown RBP26.32■■□□□ 1.8
SYNGR1-202ENST00000318801 MARK4Q96L34 752 aa26.32■■□□□ 1.8
SYNGR1-202ENST00000318801 SERHL2Q9H4I8 314 aa26.32■■□□□ 1.8
SYNGR1-202ENST00000318801 SLCO1B3Q9NPD5 702 aa26.32■■□□□ 1.8
SYNGR1-202ENST00000318801 LIPT1Q9Y234 373 aa26.32■■□□□ 1.8
SYNGR1-202ENST00000318801 CARD8Q9Y2G2 431 aa26.32■■□□□ 1.8
SYNGR1-202ENST00000318801 LRBAP50851 2863 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 NPIPA5A0A0B4J1W7 369 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 NPIPA7E9PJI5 369 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 ZNF264O43296 627 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 EIF4E2O60573 245 aaKnown RBP26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 GUSBP08236 651 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 NPIPA8P0DM63 369 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 POLR2JP52435 117 aaKnown RBP26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 ZNF117Q03924 483 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 PLPPR5Q32ZL2 321 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 HEPHL1Q6MZM0 1159 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 MSANTD1Q6ZTZ1 278 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 KIF18BQ86Y91 864 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 TOR1AIP2Q8NFQ8 470 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 RAB8BQ92930 207 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 RNASE6Q93091 150 aaKnown RBP26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 ITCHQ96J02 903 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 KCNN3Q9UGI6 736 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 MKLN1Q9UL63 735 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 WDR45Q9Y484 360 aa26.31■■□□□ 1.8
SYNGR1-202ENST00000318801 EEF1E1-BLOC1S5C9J1V9 151 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 NPIPB9F8W1W9 429 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 EEF1E1O43324 174 aaKnown RBP26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 CRHP06850 196 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 UBL4AP11441 157 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 MAGEA8P43361 318 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 RAC1P63000 192 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 MYBPHQ13203 477 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 ZNF141Q15928 474 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 GPAT3Q53EU6 434 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 PDSS1Q5T2R2 415 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 PDZK1Q5T2W1 519 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 TMCO5AQ8N6Q1 288 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 RELL2Q8NC24 303 aaPredicted RBP26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 ROPN1LQ96C74 230 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 MAGEB18Q96M61 343 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 PINK1Q9BXM7 581 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 ZNF350Q9GZX5 532 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 ZNF175Q9Y473 711 aa26.3■■□□□ 1.8
SYNGR1-202ENST00000318801 MED12LQ86YW9 2145 aa26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 SERINC4A6NH21 518 aa26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 FCMRO60667 390 aa26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 FCGR2AP12318 317 aa26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 ADH6P28332 368 aa26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 SUCLG1P53597 346 aaKnown RBP26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 CLDN15P56746 228 aa26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 FBXL19-AS1Q494R0 122 aa26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 EIF3MQ7L2H7 374 aaKnown RBP26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 RNF130Q86XS8 419 aa26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 ZNF295-AS1Q8N0V1 137 aa26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 RNF145Q96MT1 663 aa26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 ZNF559Q9BR84 538 aa26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 INPP5KQ9BT40 448 aa26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 CCDC28BQ9BUN5 200 aa26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 PRRG4Q9BZD6 226 aa26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 PIGMQ9H3S5 423 aa26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 GPC6Q9Y625 555 aaPredicted RBP26.29■■□□□ 1.8
SYNGR1-202ENST00000318801 TACC2O95359 2948 aa26.28■■□□□ 1.8
SYNGR1-202ENST00000318801 KIAA1549Q9HCM3 1950 aa26.28■■□□□ 1.8
SYNGR1-202ENST00000318801 FAM234BA2RU67 622 aa26.28■■□□□ 1.8
SYNGR1-202ENST00000318801 EIF1AYO14602 144 aaKnown RBP26.28■■□□□ 1.8
SYNGR1-202ENST00000318801 GSNP06396 782 aa26.28■■□□□ 1.8
SYNGR1-202ENST00000318801 IDH3AP50213 366 aa26.28■■□□□ 1.8
SYNGR1-202ENST00000318801 AGFG1P52594 562 aaKnown RBP26.28■■□□□ 1.8
SYNGR1-202ENST00000318801 AQP5P55064 265 aa26.28■■□□□ 1.8
SYNGR1-202ENST00000318801 CLDN20P56880 219 aa26.28■■□□□ 1.8
SYNGR1-202ENST00000318801 CBFBQ13951 182 aa26.28■■□□□ 1.8
SYNGR1-202ENST00000318801 DDX59Q5T1V6 619 aaKnown RBP eCLIP26.28■■□□□ 1.8
SYNGR1-202ENST00000318801 RFWD2Q8NHY2 731 aa26.28■■□□□ 1.8
SYNGR1-202ENST00000318801 ICAM5Q9UMF0 924 aa26.28■■□□□ 1.8
SYNGR1-202ENST00000318801 GJE1A6NN92 205 aa26.27■■□□□ 1.8
SYNGR1-202ENST00000318801 SHISA8B8ZZ34 492 aa26.27■■□□□ 1.8
SYNGR1-202ENST00000318801 CSTAP01040 98 aa26.27■■□□□ 1.8
SYNGR1-202ENST00000318801 CCR4P51679 360 aa26.27■■□□□ 1.8
SYNGR1-202ENST00000318801 IRX1P78414 480 aaPredicted RBP26.27■■□□□ 1.8
SYNGR1-202ENST00000318801 TLE4Q04727 773 aa26.27■■□□□ 1.8
SYNGR1-202ENST00000318801 FGFBP1Q14512 234 aa26.27■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms