RNA–Protein interactions for RNA: ENST00000317677.9

CPNE1-201, Transcript of copine 1, humanhuman

TSL 1 (best) BASIC

Gene CPNE1, Length 1,961 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-201ENST00000317677 DEFB133Q30KQ1 61 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 TSSK4Q6SA08 328 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 TMEM107Q6UX40 140 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 PAMR1Q6UXH9 720 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 TMEM64Q6YI46 380 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 CAMKVQ8NCB2 501 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 TMEM52Q8NDY8 209 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 NLGN4YQ8NFZ3 816 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-201ENST00000317677 OR5T3Q8NGG3 340 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 OR9A2Q8NGT5 310 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 C9orf43Q8TAL5 461 aaPredicted RBP12.16□□□□□ -0.46
CPNE1-201ENST00000317677 FANK1Q8TC84 345 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 DNASE2BQ8WZ79 361 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 RBPMSQ93062 196 aaKnown RBP12.16□□□□□ -0.46
CPNE1-201ENST00000317677 SGTBQ96EQ0 304 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 SLC35G5Q96KT7 338 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 CHCHD6Q9BRQ6 235 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 PELOQ9BRX2 385 aaKnown RBP12.16□□□□□ -0.46
CPNE1-201ENST00000317677 OR51I1Q9H343 314 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 SEMA6CQ9H3T2 930 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 ZCCHC3Q9NUD5 404 aaKnown RBP12.16□□□□□ -0.46
CPNE1-201ENST00000317677 AASSQ9UDR5 926 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 PADI2Q9Y2J8 665 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 PRELID3BQ9Y3B1 194 aa12.16□□□□□ -0.46
CPNE1-201ENST00000317677 TNRC6BQ9UPQ9 1833 aaKnown RBP12.15□□□□□ -0.46
CPNE1-201ENST00000317677 IQCMA0A1B0GVH7 501 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 SULT1B1O43704 296 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 PCDHGA12O60330 932 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 UBXN7O94888 489 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 IFNA7P01567 189 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 HLA-DQB1P01920 261 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 CSF3P09919 207 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 OR12D1P0DN82 309 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 EVI2BP34910 448 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 GPC1P35052 558 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 VSX2P58304 361 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-201ENST00000317677 SIM1P81133 766 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-201ENST00000317677 SYPL1Q16563 259 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 SOWAHCQ53LP3 525 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-201ENST00000317677 REEP3Q6NUK4 255 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 ZNF600Q6ZNG1 722 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 ZNF367Q7RTV3 350 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 GKN2Q86XP6 184 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 CCDC71Q8IV32 467 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-201ENST00000317677 SLC44A2Q8IWA5 706 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-201ENST00000317677 PHC2Q8IXK0 858 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 MAML2Q8IZL2 1156 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-201ENST00000317677 DNAJC22Q8N4W6 341 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 AVL9Q8NBF6 648 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 GPR32P1Q8NGA4 272 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 ENKURQ8TC29 256 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 C16orf58Q96GQ5 468 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 MARVELD1Q9BSK0 173 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 YIPF4Q9BSR8 244 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 RANBP3Q9H6Z4 567 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-201ENST00000317677 SYNDIG1Q9H7V2 258 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 TRIM45Q9H8W5 580 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-201ENST00000317677 IL21RQ9HBE5 538 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 PRMT8Q9NR22 394 aaPredicted RBP12.15□□□□□ -0.46
CPNE1-201ENST00000317677 ZSCAN32Q9NX65 697 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 RAB23Q9ULC3 237 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 ANGPT4Q9Y264 503 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 R4GN57 208 aa12.15□□□□□ -0.46
CPNE1-201ENST00000317677 SLC9B1P1A6NJY1 282 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 LGI1O95970 557 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 CSNK2A2P19784 350 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-201ENST00000317677 C21orf33P30042 268 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-201ENST00000317677 RORCP51449 518 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 ELOAQ14241 798 aaKnown RBP12.14□□□□□ -0.47
CPNE1-201ENST00000317677 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.14□□□□□ -0.47
CPNE1-201ENST00000317677 IFI44LQ53G44 452 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 ZMAT1Q5H9K5 638 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 OGFOD3Q6PK18 319 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 ASCL5Q7RTU5 278 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 SZRD1Q7Z422 152 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 GALNT5Q7Z7M9 940 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 COMTD1Q86VU5 262 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 ATCAYQ86WG3 371 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 OR4N5Q8IXE1 308 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 CSNK1A1LQ8N752 337 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 C19orf47Q8N9M1 422 aaKnown RBP12.14□□□□□ -0.47
CPNE1-201ENST00000317677 SPPL2AQ8TCT8 520 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 SFXN5Q8TD22 340 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 GPR151Q8TDV0 419 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 HRASLS5Q96KN8 279 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 MAP3K3Q99759 626 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 WFDC6Q9BQY6 131 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 LDAHQ9H6V9 325 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 PHF11Q9UIL8 331 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 ING4Q9UNL4 249 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 ENTPD4Q9Y227 616 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 SLC22A7Q9Y694 548 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 KCNE3Q9Y6H6 103 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 RNF215Q9Y6U7 377 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 EP300Q09472 2414 aaPredicted RBP12.14□□□□□ -0.47
CPNE1-201ENST00000317677 LMO7DNF2Z398 122 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 J3KTA2 159 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 B3GALT2O43825 422 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 DPM1O60762 260 aa12.14□□□□□ -0.47
CPNE1-201ENST00000317677 PIAS2O75928 621 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms