RNA–Protein interactions for RNA: ENST00000317610.11

RTN4-201, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 2,333 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-201ENST00000317610 HAVCR2Q8TDQ0 301 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 KAT2AQ92830 837 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 TOX2Q96NM4 488 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 SORCS2Q96PQ0 1159 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 NDC1Q9BTX1 674 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 HDAC8Q9BY41 377 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 SIDT1Q9NXL6 827 aaKnown RBP17.76■□□□□ 0.43
RTN4-201ENST00000317610 GLTPQ9NZD2 209 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 NPFFR2Q9Y5X5 522 aa17.76■□□□□ 0.43
RTN4-201ENST00000317610 NUMA1Q14980 2115 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 ANTXRLA6NF34 631 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 HYAL3O43820 417 aaPredicted RBP17.75■□□□□ 0.43
RTN4-201ENST00000317610 PRICKLE3O43900 615 aaPredicted RBP17.75■□□□□ 0.43
RTN4-201ENST00000317610 ADH1CP00326 375 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 PEPDP12955 493 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 MMP15P51511 669 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 E2F1Q01094 437 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 LYPD4Q6UWN0 246 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 SRFBP1Q8NEF9 429 aaKnown RBP17.75■□□□□ 0.43
RTN4-201ENST00000317610 OR10H4Q8NGA5 316 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 OR52L1Q8NGH7 329 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 ADAMTS14Q8WXS8 1223 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 RAB7BQ96AH8 199 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 NACC2Q96BF6 587 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 PGLYRP3Q96LB9 341 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 HS6ST2Q96MM7 605 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 RAB11FIP5Q9BXF6 653 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 MAT2BQ9NZL9 334 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 KCNN3Q9UGI6 736 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 SATB2Q9UPW6 733 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 ZNF780BQ9Y6R6 833 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 SLC22A31A6NKX4 558 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 HIDE1A8MVS5 230 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 B8ZZF3 427 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 UBL3O95164 117 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 AGR2O95994 175 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 EEF1A1P68104 462 aaKnown RBP17.75■□□□□ 0.43
RTN4-201ENST00000317610 RGS1Q08116 209 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 AGERQ15109 404 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 SLC25A35Q3KQZ1 300 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 NRROSQ86YC3 692 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 RNF113BQ8IZP6 322 aaKnown RBP17.75■□□□□ 0.43
RTN4-201ENST00000317610 SLC16A11Q8NCK7 471 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 PTP4A1Q93096 173 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 MS4A4EQ96PG1 132 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 CD180Q99467 661 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 DPH1Q9BZG8 443 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 CMC2Q9NRP2 79 aa17.75■□□□□ 0.43
RTN4-201ENST00000317610 MEN1O00255 615 aa17.74■□□□□ 0.43
RTN4-201ENST00000317610 CXCL3P19876 107 aa17.74■□□□□ 0.43
RTN4-201ENST00000317610 MAKP20794 623 aa17.74■□□□□ 0.43
RTN4-201ENST00000317610 FAM111BQ6SJ93 734 aa17.74■□□□□ 0.43
RTN4-201ENST00000317610 LUZP2Q86TE4 346 aa17.74■□□□□ 0.43
RTN4-201ENST00000317610 SIAH3Q8IW03 269 aa17.74■□□□□ 0.43
RTN4-201ENST00000317610 CMIPQ8IY22 773 aa17.74■□□□□ 0.43
RTN4-201ENST00000317610 SLC38A6Q8IZM9 456 aa17.74■□□□□ 0.43
RTN4-201ENST00000317610 TOMM5Q8N4H5 51 aa17.74■□□□□ 0.43
RTN4-201ENST00000317610 CDS1Q92903 461 aa17.74■□□□□ 0.43
RTN4-201ENST00000317610 C7orf50Q9BRJ6 194 aaKnown RBP17.74■□□□□ 0.43
RTN4-201ENST00000317610 ENKD1Q9H0I2 346 aa17.74■□□□□ 0.43
RTN4-201ENST00000317610 SYNPO2LQ9H987 977 aa17.74■□□□□ 0.43
RTN4-201ENST00000317610 CREBZFQ9NS37 354 aa17.74■□□□□ 0.43
RTN4-201ENST00000317610 LYARQ9NX58 379 aaKnown RBP17.74■□□□□ 0.43
RTN4-201ENST00000317610 APOBEC3BQ9UH17 382 aaKnown RBP17.74■□□□□ 0.43
RTN4-201ENST00000317610 TBC1D3KA0A087X1G2 549 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 A0A1B0GVI7 797 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 TRAPPC13A5PLN9 417 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 TBC1D3BA6NDS4 549 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 TBC1D3FA6NER0 549 aaPredicted RBP17.73■□□□□ 0.43
RTN4-201ENST00000317610 GPR89AB7ZAQ6 455 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 BTN3A3O00478 584 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 GPR89BP0CG08 455 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 SULT1A3P0DMM9 295 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 SULT1A4P0DMN0 295 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 CAPZA2P47755 286 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 ERVFC1P60507 584 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 ARHGAP11BQ3KRB8 267 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 EIPR1Q53HC9 387 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 TBC1D3GQ6DHY5 549 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 DMKNQ6E0U4 476 aaPredicted RBP17.73■□□□□ 0.43
RTN4-201ENST00000317610 WDR88Q6ZMY6 472 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 RTL10Q7L3V2 364 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 ADGRD2Q7Z7M1 963 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 C17orf47Q8NEP4 570 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 OR7G2Q8NG99 324 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 C10orf90Q96M02 699 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 TEAD3Q99594 435 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 TEX101Q9BY14 249 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 C6orf106Q9H6K1 298 aaPredicted RBP17.73■□□□□ 0.43
RTN4-201ENST00000317610 ZNF275Q9NSD4 429 aaPredicted RBP17.73■□□□□ 0.43
RTN4-201ENST00000317610 WDR45Q9Y484 360 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 PTPRSQ13332 1948 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 MEIKINA0A087WXM9 373 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 REM1O75628 298 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 LYPD3O95274 346 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 THBS1P07996 1170 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 TEAD1P28347 426 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 ZNF85Q03923 595 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 SLC3A1Q07837 685 aa17.73■□□□□ 0.43
RTN4-201ENST00000317610 DUSP8Q13202 625 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms