RNA–Protein interactions for RNA: ENST00000315544.6

CNOT4-201, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 3,783 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-201ENST00000315544 CDC73Q6P1J9 531 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 TMEM220Q6QAJ8 160 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 DGLUCYQ7Z3D6 616 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 C11orf74Q86VG3 221 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 ZNF615Q8N8J6 731 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 OR4K5Q8NGD3 323 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 BBS10Q8TAM1 723 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 ZPLD1Q8TCW7 415 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 ELMO1Q92556 727 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 QRSL1Q9H0R6 528 aaKnown RBP7.21□□□□□ -1.26
CNOT4-201ENST00000315544 AMBNQ9NP70 447 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 CMC2Q9NRP2 79 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 SLC23A1Q9UHI7 598 aa7.21□□□□□ -1.26
CNOT4-201ENST00000315544 IGKV3D-11A0A0A0MRZ8 115 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 ARPC4-TTLL3A0A0A6YYG9 625 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 A0A1W2PR77 199 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 GABRPO00591 440 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 HCN1O60741 890 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 NKX2-2O95096 273 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 LRG1P02750 347 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 CXCL3P19876 107 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 CD96P40200 585 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 SLC9A3P48764 834 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 CASP9P55211 416 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 LTBQ06643 244 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 TMEM35AQ53FP2 167 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 SLC23A3Q6PIS1 610 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 USP30Q70CQ3 517 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 ELMOD2Q8IZ81 293 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 DEPDC4Q8N2C3 294 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 SHDQ96IW2 340 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 ADNPQ9H2P0 1102 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 ANKRA2Q9H9E1 313 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 SLC35C2Q9NQQ7 365 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 CRLS1Q9UJA2 301 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.2□□□□□ -1.26
CNOT4-201ENST00000315544 A0A0A6YYJ9 748 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 A0A1W2PQL4 384 aaPredicted RBP7.2□□□□□ -1.26
CNOT4-201ENST00000315544 ZNF860A6NHJ4 632 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 RTCAO00442 366 aaKnown RBP7.2□□□□□ -1.26
CNOT4-201ENST00000315544 IMPA2O14732 288 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 TMEM127O75204 238 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 ZNF735P0CB33 412 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 FUT1P19526 365 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 NT5EP21589 574 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 EMDP50402 254 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 NANOS3P60323 173 aaKnown RBP7.2□□□□□ -1.26
CNOT4-201ENST00000315544 GANABQ14697 944 aaKnown RBP7.2□□□□□ -1.26
CNOT4-201ENST00000315544 SHBQ15464 509 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 CCDC85BQ15834 202 aaPredicted RBP7.2□□□□□ -1.26
CNOT4-201ENST00000315544 NDUFAF5Q5TEU4 345 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 GPR139Q6DWJ6 353 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 FAM92BQ6ZTR7 304 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 GPAT4Q86UL3 456 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 DCUN1D3Q8IWE4 304 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 VSTM2LQ96N03 204 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 LRFN5Q96NI6 719 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 SDF2Q99470 211 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 TM9SF2Q99805 663 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 ABCG5Q9H222 651 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 ZDHHC6Q9H6R6 413 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 ADPRHL2Q9NX46 363 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 FBXL4Q9UKA2 621 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 PLEKHM1Q9Y4G2 1056 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 FEZF1A0PJY2 475 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 CEACAM18A8MTB9 384 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 OR5F1O95221 314 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 IGHMP01871 453 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 AHCYP23526 432 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 NOS3P29474 1203 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 CRATP43155 626 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 PRIM2P49643 509 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 MAP2K6P52564 334 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 CDH18Q13634 790 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 NDUFA9Q16795 377 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 ZNF782Q6ZMW2 699 aaPredicted RBP7.2□□□□□ -1.26
CNOT4-201ENST00000315544 ZNF621Q6ZSS3 439 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 NOXA1Q86UR1 476 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 LINC00471Q8N535 108 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 TMEM99Q8N816 258 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 CREB3L1Q96BA8 519 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 BMFQ96LC9 184 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 PHOX2BQ99453 314 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 MMP28Q9H239 520 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 UBQLN3Q9H347 655 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 CD93Q9NPY3 652 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 C19orf53Q9UNZ5 99 aaPredicted RBP7.2□□□□□ -1.26
CNOT4-201ENST00000315544 DTX4Q9Y2E6 619 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 TMEM184BQ9Y519 407 aaPredicted RBP7.2□□□□□ -1.26
CNOT4-201ENST00000315544 HRH3Q9Y5N1 445 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 ALG5Q9Y673 324 aa7.2□□□□□ -1.26
CNOT4-201ENST00000315544 TDRD6O60522 2096 aaKnown RBP7.2□□□□□ -1.26
CNOT4-201ENST00000315544 MEIKINA0A087WXM9 373 aa7.19□□□□□ -1.26
CNOT4-201ENST00000315544 PRRG1O14668 218 aa7.19□□□□□ -1.26
CNOT4-201ENST00000315544 NDUFS4O43181 175 aa7.19□□□□□ -1.26
CNOT4-201ENST00000315544 RNF13O43567 381 aa7.19□□□□□ -1.26
CNOT4-201ENST00000315544 SELENOFO60613 162 aa7.19□□□□□ -1.26
CNOT4-201ENST00000315544 BCHEP06276 602 aa7.19□□□□□ -1.26
CNOT4-201ENST00000315544 ASAH2BP0C7U1 165 aa7.19□□□□□ -1.26
CNOT4-201ENST00000315544 IRF8Q02556 426 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms