RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 WBP2NLQ6ICG8 309 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 DNAJC5GQ8N7S2 189 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 ZFP41Q8N8Y5 198 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 NKD1Q969G9 470 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 TIGARQ9NQ88 270 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 NXT1Q9UKK6 140 aaKnown RBP12.74□□□□□ -0.37
DDX54-202ENST00000314045 A0A075B6Q4 140 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 OR2A25A4D2G3 310 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 GASTP01350 101 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 LCKP06239 509 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 PRKAR1BP31321 381 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 TRHRP34981 398 aaPredicted RBP12.74□□□□□ -0.37
DDX54-202ENST00000314045 PHC1P78364 1004 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 GAS6Q14393 721 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 HLA-BQ31612 363 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 ZNF791Q3KP31 576 aaPredicted RBP12.74□□□□□ -0.37
DDX54-202ENST00000314045 VWA2Q5GFL6 755 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 IGFN1Q86VF2 1251 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 CHDHQ8NE62 594 aaPredicted RBP12.74□□□□□ -0.37
DDX54-202ENST00000314045 OR7G2Q8NG99 324 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 IFI44Q8TCB0 444 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 MROQ9BYG7 248 aa12.74□□□□□ -0.37
DDX54-202ENST00000314045 MRPL39Q9NYK5 338 aaKnown RBP12.74□□□□□ -0.37
DDX54-202ENST00000314045 TPRP12270 2363 aaKnown RBP12.74□□□□□ -0.37
DDX54-202ENST00000314045 A0A1W2PRQ8 180 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 CLPXO76031 633 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 ITGAMP11215 1152 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 CHRNB1P11230 501 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 CHMP24386 653 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 GRPRP30550 384 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 EIF2B2P49770 351 aaKnown RBP12.73□□□□□ -0.37
DDX54-202ENST00000314045 RASGEF1BQ0VAM2 473 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 CBFBQ13951 182 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 FBXO42Q6P3S6 717 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 ABI3BPQ7Z7G0 1075 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 DUSP19Q8WTR2 217 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 NAA11Q9BSU3 229 aaPredicted RBP12.73□□□□□ -0.37
DDX54-202ENST00000314045 FUNDC2Q9BWH2 189 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 RPRD1BQ9NQG5 326 aaKnown RBP12.73□□□□□ -0.37
DDX54-202ENST00000314045 HMGN4O00479 90 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 IL33O95760 270 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 FAM53BQ14153 422 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 ELAVL1Q15717 326 aaKnown RBP12.73□□□□□ -0.37
DDX54-202ENST00000314045 HMBOX1Q6NT76 420 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 TBPL2Q6SJ96 375 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 SLITRK4Q8IW52 837 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 TMIGD2Q96BF3 282 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 NXPE2Q96DL1 559 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 ZNF717Q9BY31 904 aaPredicted RBP12.73□□□□□ -0.37
DDX54-202ENST00000314045 AMBRA1Q9C0C7 1298 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 CHRDQ9H2X0 955 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 EVA1AQ9H8M9 152 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 RXFP3Q9NSD7 469 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 UBAP1Q9NZ09 502 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 RIF1Q5UIP0 2472 aaKnown RBP12.73□□□□□ -0.37
DDX54-202ENST00000314045 A6NL46 340 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 PSMD9O00233 223 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 PRODHO43272 600 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 ACVR1BP36896 505 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 BTG2P78543 158 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 POU4F2Q12837 409 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 TSPAN31Q12999 210 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 PRAMEF8Q5VWM4 474 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 PRAMEF7Q5VXH5 474 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 DDIT4LQ96D03 193 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 CNN2Q99439 309 aaKnown RBP12.73□□□□□ -0.37
DDX54-202ENST00000314045 TMEM138Q9NPI0 162 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 PRDM7Q9NQW5 492 aa12.73□□□□□ -0.37
DDX54-202ENST00000314045 TRAV27A0A087WT01 109 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 J3QRK9 145 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 NRG2O14511 850 aaPredicted RBP12.72□□□□□ -0.37
DDX54-202ENST00000314045 CBFA2T3O75081 653 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 CD1EP15812 388 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 UBE2Q1Q7Z7E8 422 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 PAPD5Q8NDF8 572 aaKnown RBP12.72□□□□□ -0.37
DDX54-202ENST00000314045 C1orf216Q8TAB5 229 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 SFXN2Q96NB2 322 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 HIST1H2AAQ96QV6 131 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 NRTNQ99748 197 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 GPC6Q9Y625 555 aaPredicted RBP12.72□□□□□ -0.37
DDX54-202ENST00000314045 IGHV3-20A0A0C4DH32 117 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 IQCMA0A1B0GVH7 501 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 C12orf71A8MTZ7 269 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 FAM171A2A8MVW0 826 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 CTSVO60911 334 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 ALOX12BO75342 701 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 FARS2O95363 451 aaKnown RBP12.72□□□□□ -0.37
DDX54-202ENST00000314045 CELA2BP08218 269 aaPredicted RBP12.72□□□□□ -0.37
DDX54-202ENST00000314045 ZNF28P17035 718 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 ZNF43P17038 809 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 FAUP35544 74 aaKnown RBP12.72□□□□□ -0.37
DDX54-202ENST00000314045 SMN1Q16637 294 aaKnown RBP12.72□□□□□ -0.37
DDX54-202ENST00000314045 ZNF691Q5VV52 312 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 CA13Q8N1Q1 262 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 STT3BQ8TCJ2 826 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 SLC35A4Q96G79 324 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 SDF2Q99470 211 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 ARRDC1-AS1Q9H2J1 176 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 LRRN3Q9H3W5 708 aa12.72□□□□□ -0.37
DDX54-202ENST00000314045 EBF1Q9UH73 591 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms