RNA–Protein interactions for RNA: ENST00000311351.8

LSM1-201, Transcript of LSM1 homolog, mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM1, Length 1,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM1-201ENST00000311351 EIF1AYO14602 144 aaKnown RBP14.67□□□□□ -0.06
LSM1-201ENST00000311351 PSMA4P25789 261 aaKnown RBP14.67□□□□□ -0.06
LSM1-201ENST00000311351 S100A3P33764 101 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 CPA2P48052 419 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 ATP12AP54707 1039 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 SIRPAP78324 504 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 FOXF1Q12946 379 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 PON3Q15166 354 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 SLC9B1Q4ZJI4 515 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 AGBL2Q5U5Z8 902 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 SAXO2Q658L1 398 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 NXNQ6DKJ4 435 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 PPP4R4Q6NUP7 873 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 SPATA19Q7Z5L4 167 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 CDH24Q86UP0 819 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 METTL25Q8N6Q8 603 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 ZNF527Q8NB42 609 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 CHDHQ8NE62 594 aaPredicted RBP14.67□□□□□ -0.06
LSM1-201ENST00000311351 ACTRT2Q8TDY3 377 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 RAB8BQ92930 207 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 ZBTB8AQ96BR9 441 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 ARSGQ96EG1 525 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 SDF2Q99470 211 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 RBM24Q9BX46 236 aaKnown RBP14.67□□□□□ -0.06
LSM1-201ENST00000311351 ACBD3Q9H3P7 528 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 SLC24A3Q9HC58 644 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 HHATLQ9HCP6 504 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 GALNT8Q9NY28 637 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 FOXD3Q9UJU5 478 aaPredicted RBP14.67□□□□□ -0.06
LSM1-201ENST00000311351 GPR45Q9Y5Y3 372 aa14.67□□□□□ -0.06
LSM1-201ENST00000311351 TEP1Q99973 2627 aaKnown RBP14.66□□□□□ -0.06
LSM1-201ENST00000311351 ABCA4P78363 2273 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 C7orf72A4D263 438 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 NUDT14O95848 222 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 LINGO3P0C6S8 592 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 OR12D1P0DN82 309 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 IL11P20809 199 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 UQCRC2P22695 453 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 CDKN2CP42773 168 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 EIF1AXP47813 144 aaKnown RBP14.66□□□□□ -0.06
LSM1-201ENST00000311351 EEFSECP57772 596 aaKnown RBP14.66□□□□□ -0.06
LSM1-201ENST00000311351 RPS3AP61247 264 aaKnown RBP14.66□□□□□ -0.06
LSM1-201ENST00000311351 FUT5Q11128 374 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 GPR68Q15743 365 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 CTU2Q2VPK5 515 aaKnown RBP14.66□□□□□ -0.06
LSM1-201ENST00000311351 TTMPQ5BVD1 217 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 PDZK1Q5T2W1 519 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 C16orf62Q7Z3J2 963 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 MTERF4Q7Z6M4 381 aaKnown RBP14.66□□□□□ -0.06
LSM1-201ENST00000311351 CNEP1R1Q8N9A8 125 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 VPS37AQ8NEZ2 397 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 ZNF75CPQ92670 426 aaPredicted RBP14.66□□□□□ -0.06
LSM1-201ENST00000311351 NRGNQ92686 78 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 MAELQ96JY0 434 aaKnown RBP14.66□□□□□ -0.06
LSM1-201ENST00000311351 CCDC115Q96NT0 180 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 GPATCH1Q9BRR8 931 aaKnown RBP14.66□□□□□ -0.06
LSM1-201ENST00000311351 INPP5KQ9BT40 448 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 HOXD1Q9GZZ0 328 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 KCNE5Q9UJ90 142 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 ITGB1BP2Q9UKP3 347 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 PACSIN3Q9UKS6 424 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 ICAM5Q9UMF0 924 aa14.66□□□□□ -0.06
LSM1-201ENST00000311351 DUXAA6NLW8 204 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 SLCO1B7G3V0H7 640 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 H3BNH8 94 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 TNFSF11O14788 317 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 FCMRO60667 390 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 SMNDC1O75940 238 aaKnown RBP eCLIP14.65□□□□□ -0.06
LSM1-201ENST00000311351 AQP8O94778 261 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 CAPN3P20807 821 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 SHC1P29353 583 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 CHI3L1P36222 383 aaPredicted RBP14.65□□□□□ -0.06
LSM1-201ENST00000311351 CPOXP36551 454 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 SLC6A8P48029 635 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 KHKP50053 298 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 P2RX1P51575 399 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 CCR4P51679 360 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 TOMM34Q15785 309 aaPredicted RBP14.65□□□□□ -0.06
LSM1-201ENST00000311351 SGCBQ16585 318 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 ARHGAP11BQ3KRB8 267 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 OR2A2Q6IF42 318 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 HEPHL1Q6MZM0 1159 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 TMCO5AQ8N6Q1 288 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 RFWD2Q8NHY2 731 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 LINC01560Q8TB33 94 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 MIPOL1Q8TD10 442 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 ZNF524Q96C55 264 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 NEURL3Q96EH8 262 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 ADGRG7Q96K78 797 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 OR52B2Q96RD2 323 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 SLC35A5Q9BS91 424 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 ZNF350Q9GZX5 532 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 PIGMQ9H3S5 423 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 RNF122Q9H9V4 155 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 BTNL2Q9UIR0 455 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 MKLN1Q9UL63 735 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 ZNF175Q9Y473 711 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 DTNAQ9Y4J8 743 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 CELSR1Q9NYQ6 3014 aa14.65□□□□□ -0.06
LSM1-201ENST00000311351 SERINC4A6NH21 518 aa14.64□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms