RNA–Protein interactions for RNA: ENST00000309660.9

PTPN2-201, Transcript of protein tyrosine phosphatase, non-receptor type 2, humanhuman

TSL 1 (best) BASIC

Gene PTPN2, Length 3,467 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN2-201ENST00000309660 IL7P13232 177 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 MAZP56270 477 aaKnown RBP10.72□□□□□ -0.69
PTPN2-201ENST00000309660 EOGTQ5NDL2 527 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 DDI2Q5TDH0 399 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 VWA5B2Q8N398 1253 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 BPIFA2Q96DR5 249 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 RBM18Q96H35 190 aaKnown RBP10.72□□□□□ -0.69
PTPN2-201ENST00000309660 KATNB1Q9BVA0 655 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 MMP28Q9H239 520 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 TMEM165Q9HC07 324 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 DDX28Q9NUL7 540 aaKnown RBP10.72□□□□□ -0.69
PTPN2-201ENST00000309660 ALPK2Q86TB3 2170 aa10.72□□□□□ -0.69
PTPN2-201ENST00000309660 SLC9B1P1A6NJY1 282 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 CCNKO75909 580 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 NID1P14543 1247 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 NR4A2P43354 598 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 ARFIP1P53367 373 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 GAS1P54826 345 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 OR2B6P58173 313 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 EEF1A1P68104 462 aaKnown RBP10.71□□□□□ -0.69
PTPN2-201ENST00000309660 EFNB1P98172 346 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 SFSWAPQ12872 951 aaKnown RBP10.71□□□□□ -0.69
PTPN2-201ENST00000309660 DUSP8Q13202 625 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 ZNF79Q15937 498 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 NDUFAF6Q330K2 333 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 AADACL4Q5VUY2 407 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 THSD4Q6ZMP0 1018 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 ATP6V1C2Q8NEY4 427 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 RELTQ969Z4 430 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 ZNF350Q9GZX5 532 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 FBXL4Q9UKA2 621 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 CBLCQ9ULV8 474 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 UGT2A1Q9Y4X1 527 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 CLCA3PQ9Y6N3 262 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 V9GYH0 126 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 TMEM129A0AVI4 362 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 IRGMA1A4Y4 181 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 KDM4EB2RXH2 506 aaPredicted RBP10.71□□□□□ -0.69
PTPN2-201ENST00000309660 CHST10O43529 356 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 HRO43593 1189 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 AKAP8O43823 692 aaKnown RBP10.71□□□□□ -0.69
PTPN2-201ENST00000309660 GMFGO60234 142 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 GALR3O60755 368 aaPredicted RBP10.71□□□□□ -0.69
PTPN2-201ENST00000309660 IFNA16P05015 189 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 HMGN1P05114 100 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 SMIM10L1P0DMW3 83 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 IMPDH2P12268 514 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 IGFBP4P22692 258 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 BMP8BP34820 402 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 ZNF267Q14586 743 aaPredicted RBP10.71□□□□□ -0.69
PTPN2-201ENST00000309660 ARL9Q6T311 187 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 TMEM184AQ6ZMB5 413 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 BMP8AQ7Z5Y6 402 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 Q8N9G6 341 aaPredicted RBP10.71□□□□□ -0.69
PTPN2-201ENST00000309660 GATSQ8NAP1 163 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 SMIM10Q96HG1 83 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 ARHGAP9Q9BRR9 750 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 TMEM27Q9HBJ8 222 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 FGF20Q9NP95 211 aaPredicted RBP10.71□□□□□ -0.69
PTPN2-201ENST00000309660 TBC1D24Q9ULP9 559 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 MED31Q9Y3C7 131 aa10.71□□□□□ -0.69
PTPN2-201ENST00000309660 WDR87Q6ZQQ6 2873 aa10.71□□□□□ -0.7
PTPN2-201ENST00000309660 DAPL1A0PJW8 107 aa10.71□□□□□ -0.7
PTPN2-201ENST00000309660 TNFRSF10CO14798 259 aa10.71□□□□□ -0.7
PTPN2-201ENST00000309660 IL1AP01583 271 aa10.71□□□□□ -0.7
PTPN2-201ENST00000309660 ZGLP1P0C6A0 271 aa10.71□□□□□ -0.7
PTPN2-201ENST00000309660 ENDOUP21128 410 aaKnown RBP10.71□□□□□ -0.7
PTPN2-201ENST00000309660 MAOBP27338 520 aa10.71□□□□□ -0.7
PTPN2-201ENST00000309660 KRR1Q13601 381 aaKnown RBP10.71□□□□□ -0.7
PTPN2-201ENST00000309660 RAB30Q15771 203 aa10.71□□□□□ -0.7
PTPN2-201ENST00000309660 NXNL2Q5VZ03 156 aa10.71□□□□□ -0.7
PTPN2-201ENST00000309660 CA13Q8N1Q1 262 aa10.71□□□□□ -0.7
PTPN2-201ENST00000309660 NR4A3Q92570 626 aa10.71□□□□□ -0.7
PTPN2-201ENST00000309660 FAM131CQ96AQ9 280 aa10.71□□□□□ -0.7
PTPN2-201ENST00000309660 HS6ST2Q96MM7 605 aa10.71□□□□□ -0.7
PTPN2-201ENST00000309660 PRSS27Q9BQR3 290 aa10.71□□□□□ -0.7
PTPN2-201ENST00000309660 POT1Q9NUX5 634 aa10.71□□□□□ -0.7
PTPN2-201ENST00000309660 CDHR4A6H8M9 788 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 LRRN3E7EW58 273 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 CYR61O00622 381 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 PPP1R3DO95685 299 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 MRPS21P82921 87 aaKnown RBP10.7□□□□□ -0.7
PTPN2-201ENST00000309660 CDC20Q12834 499 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 PRICKLE4Q2TBC4 344 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 GXYLT1Q4G148 440 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 TMEM99Q8N816 258 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 C7orf57Q8NEG2 295 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 TMCO6Q96DC7 493 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 ABHD8Q96I13 439 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 CCDC32Q9BV29 185 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 LRRN3Q9H3W5 708 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 KLHL1Q9NR64 748 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 SOHLH2Q9NX45 425 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 PLEKHB1Q9UF11 243 aaPredicted RBP10.7□□□□□ -0.7
PTPN2-201ENST00000309660 OR10H1Q9Y4A9 318 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 A0A1B0GVC2 190 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 FAM86C2PA6NEL3 165 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 A6NIN4 97 aa10.7□□□□□ -0.7
PTPN2-201ENST00000309660 IQCJ-SCHIP1C9J366 451 aaPredicted RBP10.7□□□□□ -0.7
PTPN2-201ENST00000309660 GABRPO00591 440 aa10.7□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms