RNA–Protein interactions for RNA: ENST00000309615.7

APTX-201, Transcript of aprataxin, humanhuman

TSL 1 (best) BASIC

Gene APTX, Length 1,859 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-201ENST00000309615 NPIPA1Q9UND3 350 aa11.73□□□□□ -0.53
APTX-201ENST00000309615 CHST2Q9Y4C5 530 aa11.73□□□□□ -0.53
APTX-201ENST00000309615 M0QX08 132 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 ZNF264O43296 627 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 CYP7B1O75881 506 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 OPN1SWP03999 348 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 THBS1P07996 1170 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 TCN1P20061 433 aaPredicted RBP11.72□□□□□ -0.53
APTX-201ENST00000309615 CRYBA2P53672 197 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 EEF1A1P68104 462 aaKnown RBP11.72□□□□□ -0.53
APTX-201ENST00000309615 DMTNQ08495 405 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 SKP2Q13309 424 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 LARS2Q15031 903 aaKnown RBP11.72□□□□□ -0.53
APTX-201ENST00000309615 TOMM20Q15388 145 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 LIN52Q52LA3 116 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 SAMD4BQ5PRF9 694 aaKnown RBP11.72□□□□□ -0.53
APTX-201ENST00000309615 INTS11Q5TA45 600 aaKnown RBP11.72□□□□□ -0.53
APTX-201ENST00000309615 BNC2Q6ZN30 1099 aaPredicted RBP11.72□□□□□ -0.53
APTX-201ENST00000309615 PRICKLE2Q7Z3G6 844 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 CLIP4Q8N3C7 705 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 FAM109AQ8N4B1 249 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 FAM71CQ8NEG0 241 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 B4GALNT2Q8NHY0 566 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 CNOT9Q92600 299 aaKnown RBP11.72□□□□□ -0.53
APTX-201ENST00000309615 CACYBPQ9HB71 228 aaKnown RBP11.72□□□□□ -0.53
APTX-201ENST00000309615 AGPAT4Q9NRZ5 378 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 SEC14L3Q9UDX4 400 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 CD300AQ9UGN4 299 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 ICAM5Q9UMF0 924 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 ZNF232Q9UNY5 417 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 SLC35A3Q9Y2D2 325 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 IFT52Q9Y366 437 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 CDHR4A6H8M9 788 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 TPST1O60507 370 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 CDC40O60508 579 aaKnown RBP eCLIP11.72□□□□□ -0.53
APTX-201ENST00000309615 DNAJA2O60884 412 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 SERPINB7O75635 380 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 TRAPPC6AO75865 159 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 PDE9AO76083 593 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 MFN2O95140 757 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 ENDOUP21128 410 aaKnown RBP11.72□□□□□ -0.53
APTX-201ENST00000309615 MSX2P35548 267 aaPredicted RBP11.72□□□□□ -0.53
APTX-201ENST00000309615 CEACAM7Q14002 265 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 RNF220Q5VTB9 566 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 ARSKQ6UWY0 536 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 CCDC80Q76M96 950 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 COMTD1Q86VU5 262 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 ARMC8Q8IUR7 673 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 CMIPQ8IY22 773 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 TMCO5AQ8N6Q1 288 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 SMYD1Q8NB12 490 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 TAMM41Q96BW9 452 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 SLX1AQ9BQ83 275 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 LAT2Q9GZY6 243 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 DNAJB12Q9NXW2 375 aaKnown RBP11.72□□□□□ -0.53
APTX-201ENST00000309615 EGFL7Q9UHF1 273 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 LIPGQ9Y5X9 500 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 FAM208BQ5VWN6 2430 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 COL6A6A6NMZ7 2263 aa11.72□□□□□ -0.53
APTX-201ENST00000309615 NCKAP5O14513 1909 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 CXCR6O00574 342 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 GSTA4O15217 222 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 GYG2O15488 501 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 ADAM11O75078 769 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 HPNP05981 417 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 HSD17B1P14061 328 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 NCK1P16333 377 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 TCEA1P23193 301 aaKnown RBP11.71□□□□□ -0.53
APTX-201ENST00000309615 DPP4P27487 766 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 MSX1P28360 303 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 P2RX1P51575 399 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 CCR4P51679 360 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 TDGF1P3P51864 188 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 SLC10A1Q14973 349 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 GLIPR1L2Q4G1C9 344 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 PATL1Q86TB9 770 aaKnown RBP11.71□□□□□ -0.53
APTX-201ENST00000309615 FAM83FQ8NEG4 500 aaPredicted RBP11.71□□□□□ -0.53
APTX-201ENST00000309615 FIG4Q92562 907 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 ZNF524Q96C55 264 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 C1GALT1C1Q96EU7 318 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 SPATA5L1Q9BVQ7 753 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 PTGES2Q9H7Z7 377 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 HHATLQ9HCP6 504 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 DKKL1Q9UK85 242 aa11.71□□□□□ -0.53
APTX-201ENST00000309615 EBAG9O00559 213 aa11.7□□□□□ -0.54
APTX-201ENST00000309615 ZIC3O60481 467 aa11.7□□□□□ -0.54
APTX-201ENST00000309615 EIF4E2O60573 245 aaKnown RBP11.7□□□□□ -0.54
APTX-201ENST00000309615 NUDT14O95848 222 aa11.7□□□□□ -0.54
APTX-201ENST00000309615 EPPINO95925 133 aa11.7□□□□□ -0.54
APTX-201ENST00000309615 GKN3PP0CG01 181 aa11.7□□□□□ -0.54
APTX-201ENST00000309615 HTR1EP28566 365 aa11.7□□□□□ -0.54
APTX-201ENST00000309615 SRD5A2P31213 254 aa11.7□□□□□ -0.54
APTX-201ENST00000309615 PRKAR1BP31321 381 aa11.7□□□□□ -0.54
APTX-201ENST00000309615 KDELR2P33947 212 aa11.7□□□□□ -0.54
APTX-201ENST00000309615 DSCR4P56555 118 aaPredicted RBP11.7□□□□□ -0.54
APTX-201ENST00000309615 FOXK1P85037 733 aa11.7□□□□□ -0.54
APTX-201ENST00000309615 HSF1Q00613 529 aa11.7□□□□□ -0.54
APTX-201ENST00000309615 TLE1Q04724 770 aa11.7□□□□□ -0.54
APTX-201ENST00000309615 TOMM34Q15785 309 aaPredicted RBP11.7□□□□□ -0.54
APTX-201ENST00000309615 DUSP7Q16829 419 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms