RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 ZBTB8AQ96BR9 441 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 C1GALT1C1Q96EU7 318 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 KCTD14Q9BQ13 255 aaPredicted RBP16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 OR2B2Q9GZK3 357 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 KLHL28Q9NXS3 571 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 STOML1Q9UBI4 398 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 SEC14L3Q9UDX4 400 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 KCNE5Q9UJ90 142 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 SLC13A4Q9UKG4 626 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 ZNF443Q9Y2A4 671 aaPredicted RBP16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 NTNG1Q9Y2I2 539 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 CFAP46Q8IYW2 2715 aa16.3■□□□□ 0.2
SSSCA1-201ENST00000309328 EXPH5Q8NEV8 1989 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 A0A1B0GVC2 190 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 ANKUB1A6NFN9 424 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 FAM166BA8MTA8 275 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 NPIPA5E9PKD4 350 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 NME4O00746 187 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 TRAPPC6AO75865 159 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 PRB1P04280 392 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 PABPC4LP0CB38 370 aaKnown RBP16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 DPP4P27487 766 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 PGM1P36871 562 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 RFC3P40938 356 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 EIF1P41567 113 aaKnown RBP16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 TDGF1P3P51864 188 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 TLE1Q04724 770 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 TOMM20Q15388 145 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 CD226Q15762 336 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 MAPK14Q16539 360 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 DNAL1Q4LDG9 190 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 CMPK2Q5EBM0 449 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 RNFT1Q5M7Z0 435 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 AAGABQ6PD74 315 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 DHRS4L2Q6PKH6 230 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 ARMC8Q8IUR7 673 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 GALNT11Q8NCW6 608 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 OR5W2Q8NH69 310 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 ARSGQ96EG1 525 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 TRIM8Q9BZR9 551 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 DSN1Q9H410 356 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 LDAHQ9H6V9 325 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 TAS2R10Q9NYW0 307 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 ADA2Q9NZK5 511 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 PRPF19Q9UMS4 504 aaKnown RBP16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 NPIPA1Q9UND3 350 aa16.29■□□□□ 0.2
SSSCA1-201ENST00000309328 TRGV5A0A0B4J1U4 118 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 C7orf72A4D263 438 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 CDHR4A6H8M9 788 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 FAAHO00519 579 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 C8BP07358 591 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 RFPL3SP0C7P2 107 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 HSD17B1P14061 328 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 ZNF17P17021 662 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 PGCP20142 388 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 ADH6P28332 368 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 ZNF117Q03924 483 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 SKP2Q13309 424 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 RPS26P11Q5JNZ5 115 aaPredicted RBP16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 TRILQ7L0X0 811 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 ZNF550Q7Z398 422 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 DEFB107AQ8IZN7 70 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 GATSQ8NAP1 163 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 RBM15BQ8NDT2 890 aaKnown RBP16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 SLC26A7Q8TE54 656 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 TMEM234Q8WY98 164 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 MIB2Q96AX9 1013 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 ZG16BQ96DA0 208 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 RNF145Q96MT1 663 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 PIGQQ9BRB3 760 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 PINK1Q9BXM7 581 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 RTN4RQ9BZR6 473 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 QRSL1Q9H0R6 528 aaKnown RBP16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 MED11Q9P086 117 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 FBXL2Q9UKC9 423 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 ICAM5Q9UMF0 924 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 CARD8Q9Y2G2 431 aa16.28■□□□□ 0.2
SSSCA1-201ENST00000309328 C2orf72A6NCS6 295 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 SYT5O00445 386 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 AQP7O14520 342 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 GSTA4O15217 222 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 UBOX5O94941 541 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 NUDT14O95848 222 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 ACTL6AO96019 429 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 UBTFL6P0CB48 400 aaPredicted RBP16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 T-ENOLP0DO92 83 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 MST1P26927 711 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 HTR1EP28566 365 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 CPOXP36551 454 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 GSK3BP49841 420 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 EEF1A1P68104 462 aaKnown RBP16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 SLC25A3Q00325 362 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 PRR30Q53SZ7 412 aaPredicted RBP16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 NHSL2Q5HYW2 709 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 MRPL2Q5T653 305 aaKnown RBP16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 OR5M10Q6IEU7 315 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 ZNF605Q86T29 641 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 IFNEQ86WN2 208 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 TMCO5AQ8N6Q1 288 aa16.27■□□□□ 0.2
SSSCA1-201ENST00000309328 FAM83FQ8NEG4 500 aaPredicted RBP16.27■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms