RNA–Protein interactions for RNA: ENST00000303531.11

PRKCB-201, Transcript of protein kinase C beta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRKCB, Length 7,969 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-201ENST00000303531 SMN1Q16637 294 aaKnown RBP13.1□□□□□ -0.31
PRKCB-201ENST00000303531 SLC5A12Q1EHB4 618 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 FRMPD2BQ6IN97 320 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 HORMAD2Q8N7B1 307 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 OR5B2Q96R09 309 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 APMAPQ9HDC9 416 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 USP22Q9UPT9 525 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 A8MVJ9 347 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 GJA5P36382 358 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 SYPL1Q16563 259 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 TAZQ16635 292 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 CLSTN3Q9BQT9 956 aa13.1□□□□□ -0.31
PRKCB-201ENST00000303531 FAM183AA6NL82 134 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 FAM227AF5H4B4 570 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 CA3P07451 260 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 DCNP07585 359 aaKnown RBP13.09□□□□□ -0.31
PRKCB-201ENST00000303531 CSF1P09603 554 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 C1SP09871 688 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 PTPN6P29350 595 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 TRA2BP62995 288 aaKnown RBP13.09□□□□□ -0.31
PRKCB-201ENST00000303531 SLC16A9Q7RTY1 509 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 ZNF443Q9Y2A4 671 aaPredicted RBP13.09□□□□□ -0.31
PRKCB-201ENST00000303531 NAP1L6A6NFF2 107 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 B8ZZF3 427 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 DAP3P51398 398 aaKnown RBP13.09□□□□□ -0.31
PRKCB-201ENST00000303531 FXYD4P59646 89 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 RAB5BP61020 215 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 GLO1Q04760 184 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 LSMEM2Q8N112 164 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 UBXN10Q96LJ8 280 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 MEIS3P1A6NDR6 274 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 ALPLP05186 524 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 HIST1H1TP22492 207 aaPredicted RBP13.09□□□□□ -0.31
PRKCB-201ENST00000303531 GABRB3P28472 473 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 CPOXP36551 454 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 GPR50Q13585 617 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 AADACL4Q5VUY2 407 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 TOMM40LQ969M1 308 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 SPTSSAQ969W0 71 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 TRMT2BQ96GJ1 504 aaKnown RBP13.09□□□□□ -0.31
PRKCB-201ENST00000303531 A6NIN4 97 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 A6NIZ1 184 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 GJE1A6NN92 205 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 ACOT7O00154 380 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 NUDT7P0C024 238 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 RAP1BP61224 184 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 RAP1AP62834 184 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 TDGQ13569 410 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 TBCEQ15813 527 aaPredicted RBP13.09□□□□□ -0.31
PRKCB-201ENST00000303531 BORAQ6PGQ7 559 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 EGFL6Q8IUX8 553 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 GLYATL2Q8WU03 294 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 NT5C3BQ969T7 300 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 INTS14Q96SY0 518 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 KCNIP1Q9NZI2 227 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 RPH3AQ9Y2J0 694 aaPredicted RBP13.09□□□□□ -0.31
PRKCB-201ENST00000303531 CNTRLQ7Z7A1 2325 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 A0A1B0GVG6 124 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 P2RY14Q15391 338 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 DCUN1D4Q92564 292 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 RRNAD1Q96FB5 475 aaKnown RBP13.09□□□□□ -0.31
PRKCB-201ENST00000303531 TMEM68Q96MH6 324 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 MYADMQ96S97 322 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 OR51J1Q9H342 316 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 FAM86C1Q9NVL1 165 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 ARL3P36405 182 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 MLC1Q15049 377 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 KCTD11Q693B1 232 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 RETREG3Q86VR2 466 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 HAVCR2Q8TDQ0 301 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 ASF1BQ9NVP2 202 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 RASD1Q9Y272 281 aa13.09□□□□□ -0.31
PRKCB-201ENST00000303531 TIMM8BQ9Y5J9 83 aaPredicted RBP13.09□□□□□ -0.31
PRKCB-201ENST00000303531 CHD4Q14839 1912 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 LOC105369274A0A096LPK9 316 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 TVP23AA6NH52 213 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 LAMTOR5O43504 91 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 DNAJB6O75190 326 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 LCATP04180 440 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 HBQ1P09105 142 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 MGAT3Q09327 533 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 PGGHGQ32M88 737 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 KRBOX4Q5JUW0 171 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 CLEC14AQ86T13 490 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 OR4N4Q8N0Y3 316 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 DNAAF1Q8NEP3 725 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 C16orf58Q96GQ5 468 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 SLC35A3Q9Y2D2 325 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 UBR2Q8IWV8 1755 aa13.08□□□□□ -0.31
PRKCB-201ENST00000303531 C7orf72A4D263 438 aa13.08□□□□□ -0.32
PRKCB-201ENST00000303531 F5H5K5 113 aa13.08□□□□□ -0.32
PRKCB-201ENST00000303531 PRAMEF26H0Y7S4 382 aa13.08□□□□□ -0.32
PRKCB-201ENST00000303531 XCR1P46094 333 aa13.08□□□□□ -0.32
PRKCB-201ENST00000303531 DEFB103AP81534 67 aa13.08□□□□□ -0.32
PRKCB-201ENST00000303531 SLC7A9P82251 487 aa13.08□□□□□ -0.32
PRKCB-201ENST00000303531 GK2Q14410 553 aaPredicted RBP13.08□□□□□ -0.32
PRKCB-201ENST00000303531 UNQ6126/PRO20091Q6UXV3 157 aa13.08□□□□□ -0.32
PRKCB-201ENST00000303531 PARP16Q8N5Y8 322 aa13.08□□□□□ -0.32
PRKCB-201ENST00000303531 ZNF160Q9HCG1 818 aa13.08□□□□□ -0.32
PRKCB-201ENST00000303531 LSM5Q9Y4Y9 91 aaKnown RBP13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms