RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 EFCAB7A8K855 629 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 C17orf105B2RV13 164 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 RCBTB2O95199 551 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 NTN1O95631 604 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 LCN1P31025 176 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 ADH7P40394 386 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 SEPHS1P49903 392 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 MLLT10P55197 1068 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 MED22Q15528 200 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 AADACL4Q5VUY2 407 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 GDPGP1Q6ZNW5 385 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 SLITRK4Q8IW52 837 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 S100ZQ8WXG8 99 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 RPL3LQ92901 407 aaKnown RBP17.93■□□□□ 0.46
HOXC4-201ENST00000303406 CCNL2Q96S94 520 aaPredicted RBP17.93■□□□□ 0.46
HOXC4-201ENST00000303406 FN3KQ9H479 309 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 ISYNA1Q9NPH2 558 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 PRMT8Q9NR22 394 aaPredicted RBP17.93■□□□□ 0.46
HOXC4-201ENST00000303406 FBXO8Q9NRD0 319 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 SIDT1Q9NXL6 827 aaKnown RBP17.93■□□□□ 0.46
HOXC4-201ENST00000303406 TAS2R16Q9NYV7 291 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 SLC35A3Q9Y2D2 325 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 EXOSC1Q9Y3B2 195 aaKnown RBP17.93■□□□□ 0.46
HOXC4-201ENST00000303406 COL5A1P20908 1838 aaPredicted RBP17.93■□□□□ 0.46
HOXC4-201ENST00000303406 CDC42EP2O14613 210 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 POLR1CO15160 346 aaPredicted RBP17.93■□□□□ 0.46
HOXC4-201ENST00000303406 YKT6O15498 198 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 CSO75390 466 aaKnown RBP17.93■□□□□ 0.46
HOXC4-201ENST00000303406 IFI30P13284 250 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 TDGF1P13385 188 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 PPICP45877 212 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 BMXP51813 675 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 PGDP52209 483 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 LSM3P62310 102 aaKnown RBP17.93■□□□□ 0.46
HOXC4-201ENST00000303406 MLLT11Q13015 90 aaPredicted RBP17.93■□□□□ 0.46
HOXC4-201ENST00000303406 SRSF5Q13243 272 aaKnown RBP17.93■□□□□ 0.46
HOXC4-201ENST00000303406 C1DQ13901 141 aaKnown RBP17.93■□□□□ 0.46
HOXC4-201ENST00000303406 SPHARQ15513 63 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 ZC3H14Q6PJT7 736 aaKnown RBP17.93■□□□□ 0.46
HOXC4-201ENST00000303406 MEX3DQ86XN8 651 aaKnown RBP17.93■□□□□ 0.46
HOXC4-201ENST00000303406 SLC34A3Q8N130 599 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 OR52L1Q8NGH7 329 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 PTPMT1Q8WUK0 201 aaPredicted RBP17.93■□□□□ 0.46
HOXC4-201ENST00000303406 PLEKHA8Q96JA3 519 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 OPALINQ96PE5 141 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 DCSTAMPQ9H295 470 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 CAPN10Q9HC96 672 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 ZNF304Q9HCX3 659 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 OR10H1Q9Y4A9 318 aa17.93■□□□□ 0.46
HOXC4-201ENST00000303406 PCDH15Q96QU1 1955 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 ADAMTS20P59510 1910 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 A0A1B0GTQ1 180 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 A0A1B0GWA3 101 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 TMEM129A0AVI4 362 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 SERINC4A6NH21 518 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 MYL12BO14950 172 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 NADKO95544 446 aaPredicted RBP17.92■□□□□ 0.46
HOXC4-201ENST00000303406 ANKRD34CP0C6C1 535 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 FBLP22087 321 aaKnown RBP17.92■□□□□ 0.46
HOXC4-201ENST00000303406 CALRP27797 417 aaKnown RBP17.92■□□□□ 0.46
HOXC4-201ENST00000303406 SLC37A1P57057 533 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 DCAF7P61962 342 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 ZNF846Q147U1 533 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 ELAVL1Q15717 326 aaKnown RBP17.92■□□□□ 0.46
HOXC4-201ENST00000303406 NXNL2Q5VZ03 156 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 TMEM71Q6P5X7 295 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 LINC00114Q6XXX2 140 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 BCDIN3DQ7Z5W3 292 aaKnown RBP17.92■□□□□ 0.46
HOXC4-201ENST00000303406 ADCK1Q86TW2 530 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 ATCAYQ86WG3 371 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 Q8N9G6 341 aaPredicted RBP17.92■□□□□ 0.46
HOXC4-201ENST00000303406 ZSCAN1Q8NBB4 408 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 CCDC74AQ96AQ1 378 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 ZNF501Q96CX3 271 aaPredicted RBP17.92■□□□□ 0.46
HOXC4-201ENST00000303406 SENP5Q96HI0 755 aaPredicted RBP17.92■□□□□ 0.46
HOXC4-201ENST00000303406 SH3YL1Q96HL8 342 aaPredicted RBP17.92■□□□□ 0.46
HOXC4-201ENST00000303406 ART5Q96L15 291 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 WDR12Q9GZL7 423 aaKnown RBP17.92■□□□□ 0.46
HOXC4-201ENST00000303406 SLIRPQ9GZT3 109 aaKnown RBP17.92■□□□□ 0.46
HOXC4-201ENST00000303406 OR52D1Q9H346 318 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 UBQLN3Q9H347 655 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 HHATLQ9HCP6 504 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 FLRT3Q9NZU0 649 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 CCDC59Q9P031 241 aaKnown RBP17.92■□□□□ 0.46
HOXC4-201ENST00000303406 BAIAP2Q9UQB8 552 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 B3GNT3Q9Y2A9 372 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 MAU2Q9Y6X3 613 aa17.92■□□□□ 0.46
HOXC4-201ENST00000303406 A0A1B0GX78 115 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 TCRBV16S1A1N1A0A5B0 115 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 HTR3EA5X5Y0 456 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 ARHGAP33O14559 1287 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 IGKV3-11P04433 115 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 FOLR1P15328 257 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 BMP7P18075 431 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 MAKP20794 623 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 RORAP35398 523 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 OR1D4P47884 311 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 MTNR1AP48039 350 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 RFX3P48380 749 aa17.91■□□□□ 0.46
HOXC4-201ENST00000303406 DHPSP49366 369 aaPredicted RBP17.91■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms