RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 UBE2FQ969M7 185 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 MUL1Q969V5 352 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 LCORQ96JN0 433 aaPredicted RBP11.08□□□□□ -0.64
TPM3-202ENST00000302206 HS6ST2Q96MM7 605 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 Q96MT0 163 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 TSC22D3Q99576 134 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 PRR14Q9BWN1 585 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 SLC7A5P2Q9GIP4 190 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 YIPF3Q9GZM5 350 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 VN1R1Q9GZP7 353 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 TMEM27Q9HBJ8 222 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 RASSF1Q9NS23 344 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 SLC22A11Q9NSA0 550 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 CLN6Q9NWW5 311 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 DNAJB12Q9NXW2 375 aaKnown RBP11.08□□□□□ -0.64
TPM3-202ENST00000302206 SLC35A3Q9Y2D2 325 aa11.08□□□□□ -0.64
TPM3-202ENST00000302206 NINQ8N4C6 2090 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 NPIPA5A0A0B4J1W7 369 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 SERINC4A6NH21 518 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 CLCA1A8K7I4 914 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 EFCAB7A8K855 629 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 D6RAR5 112 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 PTGES3LE9PB15 166 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 NPIPA7E9PJI5 369 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 SCRG1O75711 98 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 NPIPA8P0DM63 369 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 PRG2P13727 222 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 DCKP27707 260 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 HTR2AP28223 471 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 MPLP40238 635 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 RBM34P42696 430 aaKnown RBP11.07□□□□□ -0.64
TPM3-202ENST00000302206 GRK6P43250 576 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 DCDP81605 110 aaKnown RBP11.07□□□□□ -0.64
TPM3-202ENST00000302206 HOXC5Q00444 222 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 PLAURQ03405 335 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 OCA2Q04671 838 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 ZFP36L1Q07352 338 aaKnown RBP11.07□□□□□ -0.64
TPM3-202ENST00000302206 NSDHLQ15738 373 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 NEDD8Q15843 81 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 OCLNQ16625 522 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 NKAIN1Q4KMZ8 207 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 VWA2Q5GFL6 755 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 ZNF385CQ66K41 422 aaPredicted RBP11.07□□□□□ -0.64
TPM3-202ENST00000302206 CASP12Q6UXS9 341 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 PTCHD4Q6ZW05 846 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 OVCH1Q7RTY7 1134 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 PRICKLE2Q7Z3G6 844 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 NKAIN4Q8IVV8 208 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 CCDC103Q8IW40 242 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 ZNF527Q8NB42 609 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 C17orf47Q8NEP4 570 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 OR8J1Q8NGP2 316 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 OR2I1PQ8NGU4 316 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 CNOT9Q92600 299 aaKnown RBP11.07□□□□□ -0.64
TPM3-202ENST00000302206 SGCDQ92629 289 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 OSTF1Q92882 214 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 ADIPOR1Q96A54 375 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 MPP4Q96JB8 637 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 CCNL2Q96S94 520 aaPredicted RBP11.07□□□□□ -0.64
TPM3-202ENST00000302206 DOK1Q99704 481 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 GPA33Q99795 319 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 PRSS27Q9BQR3 290 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 TMUB1Q9BVT8 246 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 POLDIP3Q9BY77 421 aaKnown RBP11.07□□□□□ -0.64
TPM3-202ENST00000302206 SLC26A1Q9H2B4 701 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 ARRDC1-AS1Q9H2J1 176 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 SMOC1Q9H4F8 434 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 OCEL1Q9H607 264 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 CTPS2Q9NRF8 586 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 CNOT2Q9NZN8 540 aaKnown RBP11.07□□□□□ -0.64
TPM3-202ENST00000302206 ERVK-18Q9QC07 812 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 ZNF223Q9UK11 482 aaPredicted RBP11.07□□□□□ -0.64
TPM3-202ENST00000302206 MKL2Q9ULH7 1088 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 SLC7A7Q9UM01 511 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 TMEM5Q9Y2B1 443 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 NTNG1Q9Y2I2 539 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 ADAMTS9Q9P2N4 1935 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 SDK1Q7Z5N4 2213 aa11.07□□□□□ -0.64
TPM3-202ENST00000302206 A0A0B4J2E0 115 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 A0A1B0GX12 115 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 EFCAB10A6NFE3 127 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 CCDC160A6NGH7 325 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 VSTM2BA6NLU5 285 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 H3BN98 237 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 KHNYNO15037 678 aaKnown RBP11.06□□□□□ -0.64
TPM3-202ENST00000302206 CHP2O43745 196 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 CDK1P06493 297 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 ZGLP1P0C6A0 271 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 ZNF806P0C7X5 589 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 GKN3PP0CG01 181 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 PIPP12273 146 aaPredicted RBP11.06□□□□□ -0.64
TPM3-202ENST00000302206 ACP1P24666 158 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 POU1F1P28069 291 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 GSTT1P30711 240 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 ACAA2P42765 397 aaKnown RBP11.06□□□□□ -0.64
TPM3-202ENST00000302206 GIPRP48546 466 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 SMSP52788 366 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 EFNA3P52797 238 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 TMBIM6P55061 237 aa11.06□□□□□ -0.64
TPM3-202ENST00000302206 PRKCDQ05655 676 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms