RNA–Protein interactions for RNA: ENST00000302085.8

SMAD1-201, Transcript of SMAD family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMAD1, Length 1,966 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-201ENST00000302085 ACVR2AP27037 513 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 C21orf33P30042 268 aaPredicted RBP20.53■□□□□ 0.88
SMAD1-201ENST00000302085 DCDP81605 110 aaKnown RBP20.53■□□□□ 0.88
SMAD1-201ENST00000302085 EFNB1P98172 346 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 OCA2Q04671 838 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 NDUFAF6Q330K2 333 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 PPP1R3BQ86XI6 285 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 C9orf40Q8IXQ3 194 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 AMER2Q8N7J2 671 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 TCEANCQ8N8B7 351 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 ZNF420Q8TAQ5 688 aaPredicted RBP20.53■□□□□ 0.88
SMAD1-201ENST00000302085 RNF217Q8TC41 542 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 TMEM239Q8WW34 195 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 SLC35B4Q969S0 331 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 ART5Q96L15 291 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 DOK1Q99704 481 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 ACOT13Q9NPJ3 140 aa20.53■□□□□ 0.88
SMAD1-201ENST00000302085 A0A0B4J2E0 115 aa20.52■□□□□ 0.88
SMAD1-201ENST00000302085 C2orf92A0A1B0GVN3 265 aa20.52■□□□□ 0.88
SMAD1-201ENST00000302085 A0A1B0GWA3 101 aa20.52■□□□□ 0.88
SMAD1-201ENST00000302085 A0A1B0GX12 115 aa20.52■□□□□ 0.88
SMAD1-201ENST00000302085 TMEM201Q5SNT2 666 aa20.52■□□□□ 0.88
SMAD1-201ENST00000302085 RNF113BQ8IZP6 322 aaKnown RBP20.52■□□□□ 0.88
SMAD1-201ENST00000302085 SVOPQ8N4V2 548 aa20.52■□□□□ 0.88
SMAD1-201ENST00000302085 B3GNT7Q8NFL0 401 aa20.52■□□□□ 0.88
SMAD1-201ENST00000302085 OR8J1Q8NGP2 316 aa20.52■□□□□ 0.88
SMAD1-201ENST00000302085 OR1N1Q8NGS0 311 aa20.52■□□□□ 0.88
SMAD1-201ENST00000302085 PFN4Q8NHR9 129 aa20.52■□□□□ 0.88
SMAD1-201ENST00000302085 NRSN2Q9GZP1 204 aa20.52■□□□□ 0.88
SMAD1-201ENST00000302085 CDC42EP2O14613 210 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 PRKYO43930 277 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 GDF9O60383 454 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 MAN1A2O60476 641 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 STSP08842 583 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 PCYT1AP49585 367 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 SMSP52788 366 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 ZFP36L1Q07352 338 aaKnown RBP20.52■□□□□ 0.87
SMAD1-201ENST00000302085 EBPQ15125 230 aaKnown RBP20.52■□□□□ 0.87
SMAD1-201ENST00000302085 LCN10Q6JVE6 187 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 CCDC81Q6ZN84 652 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 ZNF550Q7Z398 422 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 MRGPREQ86SM8 312 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 ALDH16A1Q8IZ83 802 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 TEX47Q8TBZ9 253 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 GRHL3Q8TE85 626 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 RORBQ92753 470 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 GAL3ST4Q96RP7 486 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 CTRCQ99895 268 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 POLDIP3Q9BY77 421 aaKnown RBP20.52■□□□□ 0.87
SMAD1-201ENST00000302085 TRIM2Q9C040 744 aa20.52■□□□□ 0.87
SMAD1-201ENST00000302085 EFCAB7A8K855 629 aa20.51■□□□□ 0.87
SMAD1-201ENST00000302085 CSTAP01040 98 aa20.51■□□□□ 0.87
SMAD1-201ENST00000302085 GPR143P51810 404 aa20.51■□□□□ 0.87
SMAD1-201ENST00000302085 DCAF7P61962 342 aa20.51■□□□□ 0.87
SMAD1-201ENST00000302085 DBX2Q6ZNG2 339 aa20.51■□□□□ 0.87
SMAD1-201ENST00000302085 OVCH1Q7RTY7 1134 aa20.51■□□□□ 0.87
SMAD1-201ENST00000302085 BCDIN3DQ7Z5W3 292 aaKnown RBP20.51■□□□□ 0.87
SMAD1-201ENST00000302085 FAM26EQ8N5C1 309 aa20.51■□□□□ 0.87
SMAD1-201ENST00000302085 LSMEM1Q8N8F7 131 aa20.51■□□□□ 0.87
SMAD1-201ENST00000302085 FGF11Q92914 225 aa20.51■□□□□ 0.87
SMAD1-201ENST00000302085 MESP1Q9BRJ9 268 aa20.51■□□□□ 0.87
SMAD1-201ENST00000302085 HOXD1Q9GZZ0 328 aa20.51■□□□□ 0.87
SMAD1-201ENST00000302085 UBQLN4Q9NRR5 601 aa20.51■□□□□ 0.87
SMAD1-201ENST00000302085 C20orf141Q9NUB4 165 aa20.51■□□□□ 0.87
SMAD1-201ENST00000302085 DNAJC27Q9NZQ0 273 aa20.51■□□□□ 0.87
SMAD1-201ENST00000302085 IGHV3-20A0A0C4DH32 117 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 H3BMQ9 156 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 KHNYNO15037 678 aaKnown RBP20.5■□□□□ 0.87
SMAD1-201ENST00000302085 TLX2O43763 284 aaPredicted RBP20.5■□□□□ 0.87
SMAD1-201ENST00000302085 UTS2O95399 124 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 HBQ1P09105 142 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 FGF5P12034 268 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 MAKP20794 623 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 CSTF2P33240 577 aaKnown RBP eCLIP20.5■□□□□ 0.87
SMAD1-201ENST00000302085 SLC15A1P46059 708 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 PRKCDQ05655 676 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 ST3GAL4Q11206 333 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 LSAMPQ13449 338 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 OCLNQ16625 522 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 SLC27A4Q6P1M0 643 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 PRR22Q8IZ63 422 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 COG8Q96MW5 612 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 IL20Q9NYY1 176 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 CDC14CA4D256 554 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 IDSB3KWA1 339 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 CHP2O43745 196 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 TRMUO75648 421 aaKnown RBP20.5■□□□□ 0.87
SMAD1-201ENST00000302085 LDOC1O95751 146 aaPredicted RBP20.5■□□□□ 0.87
SMAD1-201ENST00000302085 HEXBP07686 556 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 TMBIM6P55061 237 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 SYT6Q5T7P8 510 aaPredicted RBP20.5■□□□□ 0.87
SMAD1-201ENST00000302085 FNDC7Q5VTL7 733 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 ANKRD37Q7Z713 158 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 OSTF1Q92882 214 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 MPP4Q96JB8 637 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 Q96MT0 163 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 TSSK6Q9BXA6 273 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 WWTR1Q9GZV5 400 aa20.5■□□□□ 0.87
SMAD1-201ENST00000302085 KRCC1Q9NPI7 259 aaPredicted RBP20.5■□□□□ 0.87
SMAD1-201ENST00000302085 ATP13A2Q9NQ11 1180 aa20.5■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms