RNA–Protein interactions for RNA: ENST00000300527.8

COL6A2-201, Transcript of collagen type VI alpha 2 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL6A2, Length 3,461 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-201ENST00000300527 NDUFV2P19404 249 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 THBS2P35442 1172 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 CAMK1Q14012 370 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 TMEM255AQ5JRV8 349 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 C18orf63Q68DL7 685 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 SLC8B1Q6J4K2 584 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 C11orf88Q6PI97 169 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 APOOLQ6UXV4 268 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 BTN2A1Q7KYR7 527 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 HDDC2Q7Z4H3 204 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 NUDT13Q86X67 352 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 SLITRK4Q8IW52 837 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 ARL14Q8N4G2 192 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 OR56B4Q8NH76 319 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 DERL3Q96Q80 235 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 SEMA4CQ9C0C4 833 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 XKR8Q9H6D3 395 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 KLHL28Q9NXS3 571 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 KCNMB2Q9Y691 235 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 PLXND1Q9Y4D7 1925 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 ANTXRLA6NF34 631 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 H0YC42 278 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 KHNYNO15037 678 aaKnown RBP13.67□□□□□ -0.22
COL6A2-201ENST00000300527 KIAA0355O15063 1070 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 MT-ND5P03915 603 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 DRD2P14416 443 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 NAA10P41227 235 aaPredicted RBP13.67□□□□□ -0.22
COL6A2-201ENST00000300527 PRPF38BQ5VTL8 546 aaKnown RBP13.67□□□□□ -0.22
COL6A2-201ENST00000300527 ZNF614Q8N883 585 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 RELL2Q8NC24 303 aaPredicted RBP13.67□□□□□ -0.22
COL6A2-201ENST00000300527 OR5J2Q8NH18 312 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 OR51Q1Q8NH59 317 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 PXYLP1Q8TE99 480 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 OVCA2Q8WZ82 227 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 AIF1LQ9BQI0 150 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 UBQLN3Q9H347 655 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 LYARQ9NX58 379 aaKnown RBP13.67□□□□□ -0.22
COL6A2-201ENST00000300527 KLK11Q9UBX7 282 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 BACE2Q9Y5Z0 518 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 CDHR4A6H8M9 788 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 TIMP2P16035 220 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 BMP7P18075 431 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 EFNB1P98172 346 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 RIN1Q13671 783 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 HENMT1Q5T8I9 393 aaKnown RBP13.67□□□□□ -0.22
COL6A2-201ENST00000300527 ATRAIDQ6UW56 229 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 OR52L1Q8NGH7 329 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 CD93Q9NPY3 652 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 IFT46Q9NQC8 304 aa13.67□□□□□ -0.22
COL6A2-201ENST00000300527 SLC22A23A1A5C7 686 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 GNB5O14775 395 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 NDUFS4O43181 175 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 GKN3PP0CG01 181 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 BSGP35613 385 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 SLC25A30Q5SVS4 291 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 KIAA1211LQ6NV74 962 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 CPXM2Q8N436 756 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 SUN3Q8TAQ9 357 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 FGF11Q92914 225 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 SCLYQ96I15 445 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 AMDHD1Q96NU7 426 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 TMEM138Q9NPI0 162 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 CCL26Q9Y258 94 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 GRM6O15303 877 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 GREM1O60565 184 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 SPTBP11277 2137 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 ATP5A1P25705 553 aaKnown RBP13.66□□□□□ -0.22
COL6A2-201ENST00000300527 PSMB10P40306 273 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 MC3RP41968 323 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 OMPP47874 163 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 AGERQ15109 404 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 LINC00471Q8N535 108 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 ZNF689Q96CS4 500 aaPredicted RBP13.66□□□□□ -0.22
COL6A2-201ENST00000300527 SLC41A3Q96GZ6 507 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 OR52D1Q9H346 318 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 MRPS18AQ9NVS2 196 aaKnown RBP13.66□□□□□ -0.22
COL6A2-201ENST00000300527 ICKQ9UPZ9 632 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 LIPT1Q9Y234 373 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 HTTP42858 3142 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 ANKRD61A6NGH8 418 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 FLRT2O43155 660 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 ERVK-21P61565 698 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 FUT5Q11128 374 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 CCNJQ5T5M9 372 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 LRFN4Q6PJG9 635 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 OR52I2Q8NH67 350 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 FANK1Q8TC84 345 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 CNOT9Q92600 299 aaKnown RBP13.66□□□□□ -0.22
COL6A2-201ENST00000300527 SGPP1Q9BX95 441 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 CACYBPQ9HB71 228 aaKnown RBP13.66□□□□□ -0.22
COL6A2-201ENST00000300527 SLC35C2Q9NQQ7 365 aa13.66□□□□□ -0.22
COL6A2-201ENST00000300527 NPIPA5A0A0B4J1W7 369 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 OR6C74A6NCV1 312 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 ANXA2P2A6NMY6 339 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 NPIPA7E9PJI5 369 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 UBL3O95164 117 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 RPLP2P05387 115 aaKnown RBP13.65□□□□□ -0.22
COL6A2-201ENST00000300527 NPIPA8P0DM63 369 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 ZP3P21754 424 aa13.65□□□□□ -0.22
COL6A2-201ENST00000300527 LGALS3BPQ08380 585 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms