RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 GRHL3Q8TE85 626 aa22.57■■□□□ 1.2
GTF2A1-201ENST00000298173 TMCO6Q96DC7 493 aa22.57■■□□□ 1.2
GTF2A1-201ENST00000298173 SPACA9Q96E40 222 aaPredicted RBP22.57■■□□□ 1.2
GTF2A1-201ENST00000298173 FNDC11Q9BVV2 318 aa22.57■■□□□ 1.2
GTF2A1-201ENST00000298173 VCXQ9H320 206 aa22.57■■□□□ 1.2
GTF2A1-201ENST00000298173 EXOSC3Q9NQT5 275 aaKnown RBP22.57■■□□□ 1.2
GTF2A1-201ENST00000298173 USE1Q9NZ43 259 aa22.57■■□□□ 1.2
GTF2A1-201ENST00000298173 PDP1Q9P0J1 537 aaPredicted RBP22.57■■□□□ 1.2
GTF2A1-201ENST00000298173 ALDH3A2P51648 485 aa22.56■■□□□ 1.2
GTF2A1-201ENST00000298173 MICAQ29983 383 aa22.56■■□□□ 1.2
GTF2A1-201ENST00000298173 ANKRD34AQ69YU3 496 aa22.56■■□□□ 1.2
GTF2A1-201ENST00000298173 MARCH3Q86UD3 253 aa22.56■■□□□ 1.2
GTF2A1-201ENST00000298173 VASH2Q86V25 355 aa22.56■■□□□ 1.2
GTF2A1-201ENST00000298173 PHOSPHO1Q8TCT1 267 aa22.56■■□□□ 1.2
GTF2A1-201ENST00000298173 MAGEE2Q8TD90 523 aaPredicted RBP22.56■■□□□ 1.2
GTF2A1-201ENST00000298173 SDCCAG3Q96C92 435 aa22.56■■□□□ 1.2
GTF2A1-201ENST00000298173 ALPK1Q96QP1 1244 aa22.56■■□□□ 1.2
GTF2A1-201ENST00000298173 CTPS2Q9NRF8 586 aa22.56■■□□□ 1.2
GTF2A1-201ENST00000298173 TRBV4-1A0A0J9YWV2 114 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 CPSF4LA6NMK7 179 aaKnown RBP22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 ZNF264O43296 627 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 OR5F1O95221 314 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 ENDOUP21128 410 aaKnown RBP22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 ELAVL4P26378 380 aaKnown RBP22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 SOX3P41225 446 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 TAS2R41P59536 307 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 CLN3Q13286 438 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 SKP2Q13309 424 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 NDUFAF6Q330K2 333 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 FCRLBQ6BAA4 426 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 ZNF440Q8IYI8 595 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 SLC5A8Q8N695 610 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 LSMEM1Q8N8F7 131 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 GATSQ8NAP1 163 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 SLC7A13Q8TCU3 470 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 DNAJC9Q8WXX5 260 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 NAF1Q96HR8 494 aaKnown RBP22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 RBM4BQ9BQ04 359 aaKnown RBP22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 PSD2Q9BQI7 771 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 ZNF559Q9BR84 538 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 RBM4Q9BWF3 364 aaKnown RBP22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 SMURF2Q9HAU4 748 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 H3BNH8 94 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 OIP5O43482 229 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 CYP7B1O75881 506 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 HPRP00739 348 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 UBL4AP11441 157 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 ST3GAL3Q11203 375 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 SRSF6Q13247 344 aaKnown RBP22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 OR1Q1Q15612 314 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 JMJD6Q6NYC1 403 aaPredicted RBP22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 OPN5Q6U736 354 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 CBLN3Q6UW01 205 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 OR5M3Q8NGP4 307 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 GIPC3Q8TF64 312 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 SCNM1Q9BWG6 230 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 TBL1XR1Q9BZK7 514 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 LAT2Q9GZY6 243 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 ANKRD19PQ9H560 264 aa22.55■■□□□ 1.2
GTF2A1-201ENST00000298173 PCNX3Q9H6A9 2034 aa22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 MED13Q9UHV7 2174 aa22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 NDUFB5O43674 189 aa22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 OR6B1O95007 311 aa22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 ANGPTL1O95841 491 aa22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 GAS1P54826 345 aa22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 EPS8Q12929 822 aa22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 ZNF770Q6IQ21 691 aaPredicted RBP22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 FAHD1Q6P587 224 aa22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 PLEKHM3Q6ZWE6 761 aa22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 GDF7Q7Z4P5 450 aa22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 BRIX1Q8TDN6 353 aaKnown RBP22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 FER1L6-AS2Q96M78 137 aa22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 ATP13A2Q9NQ11 1180 aa22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 TMEFF2Q9UIK5 374 aaPredicted RBP22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 CARD8Q9Y2G2 431 aa22.54■■□□□ 1.2
GTF2A1-201ENST00000298173 LYPD3O95274 346 aa22.53■■□□□ 1.2
GTF2A1-201ENST00000298173 THRBP10828 461 aa22.53■■□□□ 1.2
GTF2A1-201ENST00000298173 DAPP51397 102 aa22.53■■□□□ 1.2
GTF2A1-201ENST00000298173 SSR4P51571 173 aa22.53■■□□□ 1.2
GTF2A1-201ENST00000298173 AIMP2Q13155 320 aaKnown RBP22.53■■□□□ 1.2
GTF2A1-201ENST00000298173 SEC23BQ15437 767 aa22.53■■□□□ 1.2
GTF2A1-201ENST00000298173 DCST1Q5T197 706 aa22.53■■□□□ 1.2
GTF2A1-201ENST00000298173 KDM4DQ6B0I6 523 aa22.53■■□□□ 1.2
GTF2A1-201ENST00000298173 DND1Q8IYX4 353 aaKnown RBP22.53■■□□□ 1.2
GTF2A1-201ENST00000298173 OR10G3Q8NGC4 313 aa22.53■■□□□ 1.2
GTF2A1-201ENST00000298173 ARSGQ96EG1 525 aa22.53■■□□□ 1.2
GTF2A1-201ENST00000298173 SLC41A3Q96GZ6 507 aa22.53■■□□□ 1.2
GTF2A1-201ENST00000298173 THOC3Q96J01 351 aaKnown RBP22.53■■□□□ 1.2
GTF2A1-201ENST00000298173 FREM2Q5SZK8 3169 aa22.53■■□□□ 1.2
GTF2A1-201ENST00000298173 TRAPPC13A5PLN9 417 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 ARRDC5A6NEK1 342 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 GTPBP1O00178 669 aaKnown RBP22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 EIF4E2O60573 245 aaKnown RBP22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 WT1P19544 449 aaPredicted RBP22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 SPINK2P20155 84 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 IFNA8P32881 189 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 TRAM2Q15035 370 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 NHSL2Q5HYW2 709 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 ZNF613Q6PF04 617 aa22.52■■□□□ 1.2
GTF2A1-201ENST00000298173 TRIM2Q9C040 744 aa22.52■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms