RNA–Protein interactions for RNA: ENST00000296051.6

HPS3-201, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS3, Length 4,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-201ENST00000296051 HORMAD2Q8N7B1 307 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 CLEC1AQ8NC01 280 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 NUP43Q8NFH3 380 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 ASB11Q8WXH4 323 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 DTD2Q96FN9 168 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 RBP7Q96R05 134 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 TRIB3Q96RU7 358 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 DPH1Q9BZG8 443 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 TMEM185BQ9H7F4 350 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 PRSS16Q9NQE7 514 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 CNOT2Q9NZN8 540 aaKnown RBP12.61□□□□□ -0.39
HPS3-201ENST00000296051 CPNE7Q9UBL6 633 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 ADAMTS7Q9UKP4 1686 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 HOXD8P13378 290 aaPredicted RBP12.61□□□□□ -0.39
HPS3-201ENST00000296051 RAB3BP20337 219 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 SDHBP21912 280 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 HOXC13P31276 330 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 GRHL2Q6ISB3 625 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 AGBL5Q8NDL9 886 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 ASB16Q96NS5 453 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 COMMD4Q9H0A8 199 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 TEX10Q9NXF1 929 aaPredicted RBP12.61□□□□□ -0.39
HPS3-201ENST00000296051 ACTR10Q9NZ32 417 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 TMEFF2Q9UIK5 374 aaPredicted RBP12.61□□□□□ -0.39
HPS3-201ENST00000296051 CSO75390 466 aaKnown RBP12.61□□□□□ -0.39
HPS3-201ENST00000296051 KIAA0895LQ68EN5 471 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 TRIM46Q7Z4K8 759 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 TMPRSS12Q86WS5 348 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 OR4K13Q8NH42 304 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 RADILQ96JH8 1075 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 WDR77Q9BQA1 342 aaPredicted RBP12.61□□□□□ -0.39
HPS3-201ENST00000296051 OR2S2Q9NQN1 319 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 UPB1Q9UBR1 384 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 RABL2BQ9UNT1 228 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 ZFC3H1O60293 1989 aaKnown RBP12.61□□□□□ -0.39
HPS3-201ENST00000296051 KIR2DS5A0A0G2JLQ3 304 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 A0A0G2JNG1 304 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 PRSS38A1L453 326 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 A8MVJ9 347 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 KIR2DS3K7RE56 304 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 PRODHO43272 600 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 KCNJ13O60928 360 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 FOLR3P41439 243 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 PITPNBP48739 271 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 ARG2P78540 354 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 MGAT3Q09327 533 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 KIR2DS5Q14953 304 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 SF3A2Q15428 464 aaKnown RBP12.61□□□□□ -0.39
HPS3-201ENST00000296051 SLC14A2Q15849 920 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 TP53I3Q53FA7 332 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 METTL2BQ6P1Q9 378 aaKnown RBP12.61□□□□□ -0.39
HPS3-201ENST00000296051 MSANTD1Q6ZTZ1 278 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 PPP1R3BQ86XI6 285 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 SPAG16Q8N0X2 631 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 TMIEQ8NEW7 156 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 TMEM234Q8WY98 164 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 C7orf34Q96L11 122 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 LGR4Q9BXB1 951 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 SYNPO2LQ9H987 977 aa12.61□□□□□ -0.39
HPS3-201ENST00000296051 PAHP00439 452 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 TFP02787 698 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 GPX2P18283 190 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 S100GP29377 79 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 UGT2B10P36537 528 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 RASGEF1BQ0VAM2 473 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 SIMC1Q8NDZ2 872 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 SLC22A8Q8TCC7 542 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 YIPF6Q96EC8 236 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 MYADMQ96S97 322 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 ALG8Q9BVK2 526 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 TMEM168Q9H0V1 697 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 MED20Q9H944 212 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 B3GAT2Q9NPZ5 323 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 RBFOX1Q9NWB1 397 aaKnown RBP12.6□□□□□ -0.39
HPS3-201ENST00000296051 SIRT5Q9NXA8 310 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 CACNG2Q9Y698 323 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 MAST2Q6P0Q8 1798 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 MEIS3P1A6NDR6 274 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 ACOT7O00154 380 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 PDCD5O14737 125 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 B4GALT3O60512 393 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 ALX3O95076 343 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 HMGN2P05204 90 aaKnown RBP12.6□□□□□ -0.39
HPS3-201ENST00000296051 PTPN6P29350 595 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 IFITM3Q01628 133 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 PIP5KL1Q5T9C9 394 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 FAM160A2Q8N612 972 aaPredicted RBP12.6□□□□□ -0.39
HPS3-201ENST00000296051 OR2A12Q8NGT7 310 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 FCAMRQ8WWV6 532 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 PMM1Q92871 262 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 ISG20Q96AZ6 181 aaKnown RBP12.6□□□□□ -0.39
HPS3-201ENST00000296051 PDLIM5Q96HC4 596 aaKnown RBP12.6□□□□□ -0.39
HPS3-201ENST00000296051 CHMP1AQ9HD42 196 aaPredicted RBP12.6□□□□□ -0.39
HPS3-201ENST00000296051 LINC01565O15544 149 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 ABLIM3O94929 683 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 GTF2F2P13984 249 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 PLP2Q04941 152 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 MLLT11Q13015 90 aaPredicted RBP12.6□□□□□ -0.39
HPS3-201ENST00000296051 NDUFAF5Q5TEU4 345 aa12.6□□□□□ -0.39
HPS3-201ENST00000296051 INO80EQ8NBZ0 244 aaPredicted RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms