RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 KEAP1Q14145 624 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 GRM7Q14831 915 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 BCL7AQ4VC05 210 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 TMEM35AQ53FP2 167 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 HSD17B12Q53GQ0 312 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 BICRALQ6AI39 1079 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 PAMR1Q6UXH9 720 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ZNF619Q8N2I2 560 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 OR5W2Q8NH69 310 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 TRMT10AQ8TBZ6 339 aaKnown RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 TMEM239Q8WW34 195 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 THAP4Q8WY91 577 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 MUL1Q969V5 352 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 TOX2Q96NM4 488 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 AMDHD1Q96NU7 426 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ULBP3Q9BZM4 244 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 TCEAL2Q9H3H9 227 aaPredicted RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 LRRN3Q9H3W5 708 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 RNF121Q9H920 327 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 THSD1Q9NS62 852 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 ST6GALNAC1Q9NSC7 600 aaPredicted RBP4.48□□□□□ -1.69
UBR1-201ENST00000290650 PLEKHA6Q9Y2H5 1048 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 GRIP1Q9Y3R0 1128 aa4.48□□□□□ -1.69
UBR1-201ENST00000290650 SCN10AQ9Y5Y9 1956 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ZSWIM8A7E2V4 1837 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 FLRT2O43155 660 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 AGR2O95994 175 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 CLUP10909 449 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ELAVL4P26378 380 aaKnown RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 GP2P55259 537 aaKnown RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 CLRN1P58418 232 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 FXYD6P3P58550 94 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ZNF91Q05481 1191 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 L3MBTL4Q8NA19 623 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 TMIEQ8NEW7 156 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ORAI1Q96D31 301 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 BPIFA2Q96DR5 249 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 CCDC115Q96NT0 180 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 MAP3K3Q99759 626 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 MS4A8Q9BY19 250 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ACTL8Q9H568 366 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 C6orf106Q9H6K1 298 aaPredicted RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 MTHFD2LQ9H903 347 aaPredicted RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 CHMP1AQ9HD42 196 aaPredicted RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 SIRT5Q9NXA8 310 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 KCNE3Q9Y6H6 103 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ASXL3Q9C0F0 2248 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 A0A0G2JPF8 293 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 A0A1W2PR48 441 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 A0A1W2PS29 197 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 DCDC2BA2VCK2 349 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 LRIT2A6NDA9 550 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 HNRNPCL3B7ZW38 293 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 HNRNPCL4P0DMR1 293 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 DCKP27707 260 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 OTX2P32243 289 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 AQP6Q13520 282 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 VEZF1Q14119 521 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 PRAMEF17Q5VTA0 474 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 CHRDL2Q6WN34 429 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 SYT9Q86SS6 491 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 MCATQ8IVS2 390 aaKnown RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 BATF2Q8N1L9 274 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 SUN5Q8TC36 379 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 RFT1Q96AA3 541 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 SLC6A7Q99884 636 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ABCG5Q9H222 651 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 SEMA4GQ9NTN9 838 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 HEATR5BQ9P2D3 2071 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 DOCK4Q8N1I0 1966 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 A0A1B0GV50 99 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 SLC5A10A0PJK1 596 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 NRG2O14511 850 aaPredicted RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 KIAA0355O15063 1070 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 FCMRO60667 390 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 CSO75390 466 aaKnown RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 UPK1BO75841 260 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 RGS9O75916 674 aaPredicted RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 MT-ND4P03905 459 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 TNFSF8P32971 234 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 TGFBR2P37173 567 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ZNF81P51508 661 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ADPRHP54922 357 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 WNT4P56705 351 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 RAB15P59190 212 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 INSL4Q14641 139 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 NKPD1Q17RQ9 610 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 TMEM69Q5SWH9 247 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 ANKRD33Q7Z3H0 272 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 PTRH1Q86Y79 214 aaKnown RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 BBS1Q8NFJ9 593 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 COQ8AQ8NI60 647 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 SGTBQ96EQ0 304 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 OR52D1Q9H346 318 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 PELI2Q9HAT8 420 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 RXFP3Q9NSD7 469 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 GSKIPQ9P0R6 139 aa4.47□□□□□ -1.69
UBR1-201ENST00000290650 MRPS17Q9Y2R5 130 aaKnown RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 EXOSC1Q9Y3B2 195 aaKnown RBP4.47□□□□□ -1.69
UBR1-201ENST00000290650 RALGAPA2Q2PPJ7 1873 aa4.47□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms