RNA–Protein interactions for RNA: ENST00000282516.12

NIPBL-201, Transcript of NIPBL, cohesin loading factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NIPBL, Length 10,435 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-201ENST00000282516 KCNK13Q9HB14 408 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 PATZ1Q9HBE1 687 aaKnown RBP8.26□□□□□ -1.09
NIPBL-201ENST00000282516 NPFFR2Q9Y5X5 522 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 WASH4PA8MWX3 477 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 GPR39O43194 453 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 HOXD11P31277 338 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-201ENST00000282516 AGTR2P50052 363 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 RPS18P62269 152 aaKnown RBP8.26□□□□□ -1.09
NIPBL-201ENST00000282516 MEF2AQ02078 507 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-201ENST00000282516 MANEALQ5VSG8 457 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 FAM69BQ5VUD6 431 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 ENPP6Q6UWR7 440 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 FKRPQ9H9S5 495 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 POLHQ9Y253 713 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 H7C1Q1 480 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 TRAF3IP2O43734 574 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-201ENST00000282516 UNGP13051 313 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-201ENST00000282516 JUPP14923 745 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 PROX2Q3B8N5 592 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 PLD6Q8N2A8 252 aaKnown RBP8.26□□□□□ -1.09
NIPBL-201ENST00000282516 SYNPRQ8TBG9 265 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 SMIM3Q9BZL3 60 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 ACAD8Q9UKU7 415 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 GOLT1BQ9Y3E0 138 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 CXorf49A8MYA2 514 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-201ENST00000282516 KRBOX1C9JBD0 128 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 SURF4O15260 269 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 SMPD1P17405 629 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 CATR1Q13166 79 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 UPP1Q16831 310 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 AVPI1Q5T686 147 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 PLXDC1Q8IUK5 500 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 MICU1Q9BPX6 476 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 PDCD1LG2Q9BQ51 273 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 TPPP3Q9BW30 176 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 HRH4Q9H3N8 390 aa8.26□□□□□ -1.09
NIPBL-201ENST00000282516 ZBTB20Q9HC78 741 aaPredicted RBP8.26□□□□□ -1.09
NIPBL-201ENST00000282516 hCG_1809904A0A1W2PP81 198 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 A0A1W2PPE2 198 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 A0A1W2PR64 198 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 A0A1W2PRV1 198 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 TCRBV21S2A2A0A5A6 115 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 DFFBO76075 338 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 TBPP20226 339 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 TACR3P29371 465 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 PRDX3P30048 256 aaKnown RBP8.25□□□□□ -1.09
NIPBL-201ENST00000282516 TXNDC8Q6A555 127 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 OR4A16Q8NH70 328 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 MUL1Q969V5 352 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 ENKD1Q9H0I2 346 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 PLEK2Q9NYT0 353 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 SLC2A6Q9UGQ3 507 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 CEP250Q9BV73 2442 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 F5H5K5 113 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 TRAPPC2LH3BP13 241 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 ADAMTS4O75173 837 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 C1GALT1C1LP0DN25 315 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 CLDN6P56747 220 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 ARHGAP1Q07960 439 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 MGAT3Q09327 533 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 AADACL3Q5VUY0 350 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 ASB17Q8WXJ9 295 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 SLIT2O94813 1529 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 NDUFB2O95178 105 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 PTHP01270 115 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 EPHA4P54764 986 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 SLC35B2Q8TB61 432 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 CORO2AQ92828 525 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 OR2M2Q96R28 347 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 VPS25Q9BRG1 176 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 C1orf123Q9NWV4 160 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 ANHXE9PGG2 379 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 KCNK2O95069 426 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 GGT1P19440 569 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 CA5AP35218 305 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 FOLR3P41439 243 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 ATP1B3P54709 279 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 SOHLH1Q5JUK2 328 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 NRMQ8IXM6 262 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 THAP7Q9BT49 309 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-201ENST00000282516 NGBQ9NPG2 151 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 MPC1LP0DKB6 136 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 TMEM115Q12893 351 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-201ENST00000282516 GRM7Q14831 915 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 RNLSQ5VYX0 342 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 PHF6Q8IWS0 365 aaKnown RBP eCLIP8.25□□□□□ -1.09
NIPBL-201ENST00000282516 NHLRC2Q8NBF2 726 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 WASH6PQ9NQA3 447 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 AIG1Q9NVV5 245 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 EHFQ9NZC4 300 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 EBF1Q9UH73 591 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 ELK1P19419 428 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 SNCAP37840 140 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 BLOC1S3Q6QNY0 202 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 FAM111BQ6SJ93 734 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 MKRN2Q9H000 416 aaKnown RBP8.25□□□□□ -1.09
NIPBL-201ENST00000282516 MYOTQ9UBF9 498 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 FTSJ1Q9UET6 329 aa8.25□□□□□ -1.09
NIPBL-201ENST00000282516 KLF8O95600 359 aaPredicted RBP8.25□□□□□ -1.09
NIPBL-201ENST00000282516 ACVRL1P37023 503 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms