RNA–Protein interactions for RNA: ENST00000277657.12

CCDC7-201, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 1,899 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-201ENST00000277657 SPSB2Q99619 263 aa20.32■□□□□ 0.84
CCDC7-201ENST00000277657 TRIM2Q9C040 744 aa20.32■□□□□ 0.84
CCDC7-201ENST00000277657 FLRT3Q9NZU0 649 aa20.32■□□□□ 0.84
CCDC7-201ENST00000277657 ERVK-18Q9QC07 812 aa20.32■□□□□ 0.84
CCDC7-201ENST00000277657 SNX5Q9Y5X3 404 aa20.32■□□□□ 0.84
CCDC7-201ENST00000277657 PCMT1P22061 227 aa20.31■□□□□ 0.84
CCDC7-201ENST00000277657 GIPRP48546 466 aa20.31■□□□□ 0.84
CCDC7-201ENST00000277657 SNRPGP62308 76 aaKnown RBP20.31■□□□□ 0.84
CCDC7-201ENST00000277657 CDK5Q00535 292 aa20.31■□□□□ 0.84
CCDC7-201ENST00000277657 FNDC7Q5VTL7 733 aa20.31■□□□□ 0.84
CCDC7-201ENST00000277657 PTCHD4Q6ZW05 846 aa20.31■□□□□ 0.84
CCDC7-201ENST00000277657 SLC29A4Q7RTT9 530 aa20.31■□□□□ 0.84
CCDC7-201ENST00000277657 FAM71CQ8NEG0 241 aa20.31■□□□□ 0.84
CCDC7-201ENST00000277657 C17orf47Q8NEP4 570 aa20.31■□□□□ 0.84
CCDC7-201ENST00000277657 TRUB1Q8WWH5 349 aaKnown RBP20.31■□□□□ 0.84
CCDC7-201ENST00000277657 SEMA4CQ9C0C4 833 aa20.31■□□□□ 0.84
CCDC7-201ENST00000277657 CXorf56Q9H5V9 222 aa20.31■□□□□ 0.84
CCDC7-201ENST00000277657 FKBP14Q9NWM8 211 aa20.31■□□□□ 0.84
CCDC7-201ENST00000277657 PSORS1C1Q9UIG5 152 aa20.31■□□□□ 0.84
CCDC7-201ENST00000277657 ZNF223Q9UK11 482 aaPredicted RBP20.31■□□□□ 0.84
CCDC7-201ENST00000277657 PPIEQ9UNP9 301 aaKnown RBP20.31■□□□□ 0.84
CCDC7-201ENST00000277657 SLC35A3Q9Y2D2 325 aa20.31■□□□□ 0.84
CCDC7-201ENST00000277657 CDX4O14627 284 aaPredicted RBP20.3■□□□□ 0.84
CCDC7-201ENST00000277657 PIP5K1CO60331 668 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 CSTAP01040 98 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 CCL4P13236 92 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 CCKBRP32239 447 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 STAT5AP42229 794 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 HLA-DQA1Q5Y7H0 255 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 GTF2IRD2BQ6EKJ0 949 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 MRPL14Q6P1L8 145 aaKnown RBP20.3■□□□□ 0.84
CCDC7-201ENST00000277657 GTF2IRD2Q86UP8 949 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 ZNF527Q8NB42 609 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 NFAM1Q8NET5 270 aaPredicted RBP20.3■□□□□ 0.84
CCDC7-201ENST00000277657 TMEM239Q8WW34 195 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 SLC25A19Q9HC21 320 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 KRCC1Q9NPI7 259 aaPredicted RBP20.3■□□□□ 0.84
CCDC7-201ENST00000277657 IGHV3-20A0A0C4DH32 117 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 A0A1B0GWA3 101 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 CHP2O43745 196 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 UTS2O95399 124 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 CYC1P08574 325 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 CD59P13987 128 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 ZNF28P17035 718 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 EMP2P54851 167 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 GINS1Q14691 196 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 SLCO6A1Q86UG4 719 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 METTL21AQ8WXB1 218 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 ARSGQ96EG1 525 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 LRFN5Q96NI6 719 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 PLA2G12AQ9BZM1 189 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 YIPF3Q9GZM5 350 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 NRSN2Q9GZP1 204 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 DSN1Q9H410 356 aa20.3■□□□□ 0.84
CCDC7-201ENST00000277657 RALGAPA1Q6GYQ0 2036 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 SH3D21A4FU49 640 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 SAGE2PA6NJ88 616 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 RGS10O43665 173 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 ITIH1P19827 911 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 TBXA2RP21731 343 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 CASP12Q6UXS9 341 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 PRSS48Q7RTY5 328 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 APCDD1LQ8NCL9 501 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 B3GNT7Q8NFL0 401 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 OR13F1Q8NGS4 319 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 HSPBAP1Q96EW2 488 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 MESP1Q9BRJ9 268 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 ZNF426Q9BUY5 554 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 CCDC90BQ9GZT6 254 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 EGLN3Q9H6Z9 239 aa20.29■□□□□ 0.84
CCDC7-201ENST00000277657 AKIRIN1Q9H9L7 192 aaPredicted RBP20.29■□□□□ 0.84
CCDC7-201ENST00000277657 CLCA1A8K7I4 914 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 TSPAN2O60636 221 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 SEC14L2O76054 403 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 GPR4P46093 362 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 NR0B1P51843 470 aaKnown RBP20.28■□□□□ 0.84
CCDC7-201ENST00000277657 EMX1Q04741 257 aaPredicted RBP20.28■□□□□ 0.84
CCDC7-201ENST00000277657 PRKCDQ05655 676 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 TMEM201Q5SNT2 666 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 MRGPREQ86SM8 312 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 ZNF440Q8IYI8 595 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 IQCF1Q8N6M8 205 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 OR8D4Q8NGM9 314 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 OR8J1Q8NGP2 316 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 WDR36Q8NI36 951 aaKnown RBP20.28■□□□□ 0.84
CCDC7-201ENST00000277657 HS6ST2Q96MM7 605 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 ADOQ96SZ5 270 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 WDR54Q9H977 334 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 IL20Q9NYY1 176 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 CCDC160A6NGH7 325 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 ZNF806P0C7X5 589 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 SLC5A2P31639 672 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 SMSP52788 366 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 PSPHP78330 225 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 NDUFAF6Q330K2 333 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 ACSM5Q6NUN0 579 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 TMEM205Q6UW68 189 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 AHSA2Q719I0 299 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 PRR22Q8IZ63 422 aa20.28■□□□□ 0.84
CCDC7-201ENST00000277657 SLC34A3Q8N130 599 aa20.28■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 138.5 ms