RNA–Protein interactions for RNA: ENST00000274327.11

TRIM23-202, Transcript of tripartite motif containing 23, humanhuman

TSL 1 (best) BASIC

Gene TRIM23, Length 1,829 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23-202ENST00000274327 FNDC7Q5VTL7 733 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 LAIR2Q6ISS4 152 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 CD300LDQ6UXZ3 194 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 RAB11FIP2Q7L804 512 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 ZER1Q7Z7L7 766 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 CCDC71Q8IV32 467 aaPredicted RBP13.38□□□□□ -0.27
TRIM23-202ENST00000274327 NKAIN4Q8IVV8 208 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 SLC34A3Q8N130 599 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 AMER2Q8N7J2 671 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 ZNF614Q8N883 585 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 DOK1Q99704 481 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 PRRX2Q99811 253 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 ZNF559Q9BR84 538 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 UCK2Q9BZX2 261 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 NRSN2Q9GZP1 204 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 CHCHD3Q9NX63 227 aaKnown RBP13.38□□□□□ -0.27
TRIM23-202ENST00000274327 FLRT3Q9NZU0 649 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 NCDNQ9UBB6 729 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 OTOGLQ3ZCN5 2332 aa13.38□□□□□ -0.27
TRIM23-202ENST00000274327 LOC102723996A0A087X1L8 192 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 TRAPPC13A5PLN9 417 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 C9J4A7 227 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 PFDN1O60925 122 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 CSO75390 466 aaKnown RBP13.37□□□□□ -0.27
TRIM23-202ENST00000274327 MT-CO3P00414 261 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 MMP11P24347 488 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 ELK4P28324 431 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 HOXD11P31277 338 aaPredicted RBP13.37□□□□□ -0.27
TRIM23-202ENST00000274327 RNF4P78317 190 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 LSM11P83369 360 aaKnown RBP eCLIP13.37□□□□□ -0.27
TRIM23-202ENST00000274327 MEP1AQ16819 746 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 Q6ZPB1 254 aaPredicted RBP13.37□□□□□ -0.27
TRIM23-202ENST00000274327 GLRX5Q86SX6 157 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 GALNT6Q8NCL4 622 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 ACOT11Q8WXI4 607 aaPredicted RBP13.37□□□□□ -0.27
TRIM23-202ENST00000274327 HDAC2Q92769 488 aaKnown RBP13.37□□□□□ -0.27
TRIM23-202ENST00000274327 TP53INP1Q96A56 240 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 VMP1Q96GC9 406 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 TAAR9Q96RI9 348 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 LPAR4Q99677 370 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 APOL4Q9BPW4 351 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 PRSS27Q9BQR3 290 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 DDA1Q9BW61 102 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 ING2Q9H160 280 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 PALMDQ9NP74 551 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 UBQLN4Q9NRR5 601 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 PCDHGA6Q9Y5G7 932 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 EXPH5Q8NEV8 1989 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 PCNX2A6NKB5 2137 aa13.37□□□□□ -0.27
TRIM23-202ENST00000274327 TEX51A0A1B0GUA7 166 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 TRIM64BA6NI03 449 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 ADAM11O75078 769 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 UTS2O95399 124 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 DLGAP3O95886 979 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 TP53P04637 393 aaPredicted RBP13.36□□□□□ -0.27
TRIM23-202ENST00000274327 OSMP13725 252 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 GGT2P36268 569 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 CRISP1P54107 249 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 TARDBPQ13148 414 aaKnown RBP eCLIP13.36□□□□□ -0.27
TRIM23-202ENST00000274327 NCF4Q15080 339 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 C6orf141Q5SZD1 244 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 ZNF550Q7Z398 422 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 FAM71CQ8NEG0 241 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 NUBPLQ8TB37 319 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 FNDC8Q8TC99 324 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 LRFN3Q9BTN0 628 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 SLC7A7Q9UM01 511 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 SLC35A3Q9Y2D2 325 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 HEATR5AQ86XA9 2040 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 PMS2P1A4D2B8 440 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 ABCB7O75027 752 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 KLF7O75840 302 aaPredicted RBP13.36□□□□□ -0.27
TRIM23-202ENST00000274327 STK17BO94768 372 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 NTN1O95631 604 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 UMODP07911 640 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 IMPDH2P12268 514 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 TBXA2RP21731 343 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 CHMP24386 653 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 PCSK6P29122 969 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 OMPP47874 163 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 SLC26A5P58743 744 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 IL5RAQ01344 420 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 ALDH6A1Q02252 535 aaKnown RBP13.36□□□□□ -0.27
TRIM23-202ENST00000274327 COX10Q12887 443 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 CDK5R2Q13319 367 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 RBM48Q5RL73 367 aaKnown RBP13.36□□□□□ -0.27
TRIM23-202ENST00000274327 ZNF613Q6PF04 617 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 HSDL2Q6YN16 418 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 PRICKLE2Q7Z3G6 844 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 PRR22Q8IZ63 422 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 LSMEM1Q8N8F7 131 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 ZNF527Q8NB42 609 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 OR8K3Q8NH51 312 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 GNPDA2Q8TDQ7 276 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 C8orf44Q96CB5 159 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 OMA1Q96E52 524 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 GPA33Q99795 319 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 COL25A1Q9BXS0 654 aaPredicted RBP13.36□□□□□ -0.27
TRIM23-202ENST00000274327 SPRY4Q9C004 299 aa13.36□□□□□ -0.27
TRIM23-202ENST00000274327 PISDQ9UG56 409 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms