RNA–Protein interactions for RNA: ENST00000270061.11

SSBP4-201, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SSBP4, Length 1,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-201ENST00000270061 TTC36A6NLP5 189 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 FFAR1O14842 300 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 PRAMEF2O60811 474 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 STX11O75558 287 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 GADD45GO95257 159 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 ZNF155Q12901 538 aaPredicted RBP22.63■■□□□ 1.21
SSBP4-201ENST00000270061 MFAP5Q13361 173 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 ZNF267Q14586 743 aaPredicted RBP22.63■■□□□ 1.21
SSBP4-201ENST00000270061 ZNHIT3Q15649 155 aaPredicted RBP22.63■■□□□ 1.21
SSBP4-201ENST00000270061 COMTD1Q86VU5 262 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 SIRT6Q8N6T7 355 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 PIK3C3Q8NEB9 887 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 ZNF555Q8NEP9 628 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 OR7G1Q8NGA0 311 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 OR52P1PQ8NH57 321 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 GPR151Q8TDV0 419 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 VSTM2LQ96N03 204 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 ARHGDIGQ99819 225 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 QRSL1Q9H0R6 528 aaKnown RBP22.63■■□□□ 1.21
SSBP4-201ENST00000270061 CSAG2Q9Y5P2 127 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 SVILO95425 2214 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 LRRK2Q5S007 2527 aa22.63■■□□□ 1.21
SSBP4-201ENST00000270061 SYNDIG1LA6NDD5 238 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 ARRDC5A6NEK1 342 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 SLC16A6O15403 523 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 SEMA7AO75326 666 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 IFNA16P05015 189 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 THBS1P07996 1170 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 ITGAMP11215 1152 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 RPS4Y1P22090 263 aaKnown RBP22.62■■□□□ 1.21
SSBP4-201ENST00000270061 GABRA3P34903 492 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 POU6F2P78424 691 aaPredicted RBP22.62■■□□□ 1.21
SSBP4-201ENST00000270061 PSG6Q00889 435 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 LACC1Q8IV20 430 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 PEX5LQ8IYB4 626 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 ZNF619Q8N2I2 560 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 ATG16L2Q8NAA4 619 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 TSLPQ969D9 159 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 WFDC6Q9BQY6 131 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 MKLN1Q9UL63 735 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 ZNF232Q9UNY5 417 aa22.62■■□□□ 1.21
SSBP4-201ENST00000270061 ANXA8P13928 327 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 CDH2P19022 906 aaPredicted RBP22.61■■□□□ 1.21
SSBP4-201ENST00000270061 SSTR4P31391 388 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 SMIM11AP58511 58 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 EXOC3L2Q2M3D2 409 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 BTBD16Q32M84 506 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 PRR30Q53SZ7 412 aaPredicted RBP22.61■■□□□ 1.21
SSBP4-201ENST00000270061 PLAG1Q6DJT9 500 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 VRK2Q86Y07 508 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 RBM45Q8IUH3 476 aaKnown RBP22.61■■□□□ 1.21
SSBP4-201ENST00000270061 VANGL1Q8TAA9 524 aaPredicted RBP22.61■■□□□ 1.21
SSBP4-201ENST00000270061 PIK3R3Q92569 461 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 CACYBPQ9HB71 228 aaKnown RBP22.61■■□□□ 1.21
SSBP4-201ENST00000270061 CHST2Q9Y4C5 530 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 AGAP5A6NIR3 686 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 HRKO00198 91 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 ZNF615Q8N8J6 731 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 OR10G2Q8NGC3 310 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 PHF10Q8WUB8 498 aaKnown RBP22.61■■□□□ 1.21
SSBP4-201ENST00000270061 LPAR4Q99677 370 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 OR10A5Q9H207 317 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 NMNAT1Q9HAN9 279 aaPredicted RBP22.61■■□□□ 1.21
SSBP4-201ENST00000270061 KIF17Q9P2E2 1029 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 A4GNTQ9UNA3 340 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 ERVK-19Q9WJR5 959 aa22.61■■□□□ 1.21
SSBP4-201ENST00000270061 M0R3H8 397 aa22.6■■□□□ 1.21
SSBP4-201ENST00000270061 KIAA0513O60268 411 aa22.6■■□□□ 1.21
SSBP4-201ENST00000270061 IL18R1Q13478 541 aa22.6■■□□□ 1.21
SSBP4-201ENST00000270061 GANABQ14697 944 aaKnown RBP22.6■■□□□ 1.21
SSBP4-201ENST00000270061 LARS2Q15031 903 aaKnown RBP22.6■■□□□ 1.21
SSBP4-201ENST00000270061 PAPD4Q6PIY7 484 aaKnown RBP22.6■■□□□ 1.21
SSBP4-201ENST00000270061 DEF8Q6ZN54 512 aa22.6■■□□□ 1.21
SSBP4-201ENST00000270061 AMER2Q8N7J2 671 aa22.6■■□□□ 1.21
SSBP4-201ENST00000270061 OR6T1Q8NGN1 323 aa22.6■■□□□ 1.21
SSBP4-201ENST00000270061 OR52J3Q8NH60 311 aa22.6■■□□□ 1.21
SSBP4-201ENST00000270061 PTPMT1Q8WUK0 201 aaPredicted RBP22.6■■□□□ 1.21
SSBP4-201ENST00000270061 NR4A3Q92570 626 aa22.6■■□□□ 1.21
SSBP4-201ENST00000270061 KRT84Q9NSB2 600 aa22.6■■□□□ 1.21
SSBP4-201ENST00000270061 KLHL28Q9NXS3 571 aa22.6■■□□□ 1.21
SSBP4-201ENST00000270061 PRODH2Q9UF12 536 aa22.6■■□□□ 1.21
SSBP4-201ENST00000270061 SLC13A4Q9UKG4 626 aa22.6■■□□□ 1.21
SSBP4-201ENST00000270061 ZNF443Q9Y2A4 671 aaPredicted RBP22.6■■□□□ 1.21
SSBP4-201ENST00000270061 DOPEY2Q9Y3R5 2298 aa22.6■■□□□ 1.21
SSBP4-201ENST00000270061 LOC100130705A0A1B0GUX0 176 aa22.59■■□□□ 1.21
SSBP4-201ENST00000270061 TCRBV16S1A1N1A0A5B0 115 aa22.59■■□□□ 1.21
SSBP4-201ENST00000270061 C17orf105B2RV13 164 aa22.59■■□□□ 1.21
SSBP4-201ENST00000270061 MITFO75030 526 aaPredicted RBP22.59■■□□□ 1.21
SSBP4-201ENST00000270061 UGT2B11O75310 529 aa22.59■■□□□ 1.21
SSBP4-201ENST00000270061 CLIC3O95833 236 aa22.59■■□□□ 1.21
SSBP4-201ENST00000270061 DBIP07108 87 aaKnown RBP22.59■■□□□ 1.21
SSBP4-201ENST00000270061 TNNI3P19429 210 aa22.59■■□□□ 1.21
SSBP4-201ENST00000270061 PIGAP37287 484 aa22.59■■□□□ 1.21
SSBP4-201ENST00000270061 RPS6KA3P51812 740 aa22.59■■□□□ 1.21
SSBP4-201ENST00000270061 EXT1Q16394 746 aa22.59■■□□□ 1.21
SSBP4-201ENST00000270061 CCNJQ5T5M9 372 aa22.59■■□□□ 1.21
SSBP4-201ENST00000270061 MUS81Q96NY9 551 aa22.59■■□□□ 1.21
SSBP4-201ENST00000270061 ALPK1Q96QP1 1244 aa22.59■■□□□ 1.21
SSBP4-201ENST00000270061 FEVQ99581 238 aa22.59■■□□□ 1.21
SSBP4-201ENST00000270061 CNPPD1Q9BV87 410 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms