RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 G3V3Y1 287 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 APOC1P02654 83 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 OCLNQ16625 522 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 SYT13Q7L8C5 426 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 ZNF548Q8NEK5 533 aaPredicted RBP12.82□□□□□ -0.36
NPC1-201ENST00000269228 ZFP90Q8TF47 636 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 SGCDQ92629 289 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 TAMM41Q96BW9 452 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 OR52A5Q9H2C5 316 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 PIGUQ9H490 435 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 EIF3KQ9UBQ5 218 aaKnown RBP12.82□□□□□ -0.36
NPC1-201ENST00000269228 ASB1Q9Y576 335 aa12.82□□□□□ -0.36
NPC1-201ENST00000269228 TRBV5-4A0A0C4DH59 114 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 C5orf51A6NDU8 294 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 PHYHO14832 338 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 SLITRK5O94991 958 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 VNN2O95498 520 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 F10P00742 488 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 HTR3AP46098 478 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 POU3F4P49335 361 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 IFI44Q8TCB0 444 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 ELF4Q99607 663 aaPredicted RBP12.81□□□□□ -0.36
NPC1-201ENST00000269228 OR52D1Q9H346 318 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 FOLH1BQ9HBA9 442 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 CD1CP29017 333 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 CRABP1P29762 137 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 RPS5P46782 204 aaKnown RBP12.81□□□□□ -0.36
NPC1-201ENST00000269228 DAP3P51398 398 aaKnown RBP12.81□□□□□ -0.36
NPC1-201ENST00000269228 LIM2P55344 173 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 NKX3-2P78367 333 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 FAM71E1Q6IPT2 247 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 PAQR7Q86WK9 346 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 ZNF611Q8N823 705 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 ZNF420Q8TAQ5 688 aaPredicted RBP12.81□□□□□ -0.36
NPC1-201ENST00000269228 UTP4Q969X6 686 aaKnown RBP12.81□□□□□ -0.36
NPC1-201ENST00000269228 FRMD6Q96NE9 622 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 INIPQ9NRY2 104 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 EXTL2Q9UBQ6 330 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 SH3BGRL2Q9UJC5 107 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 PCDHGB6Q9Y5F9 930 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 KIAA0513O60268 411 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 ST6GAL1P15907 406 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 IDUAP35475 653 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 CPOXP36551 454 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 EPHA4P54764 986 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 TMBIM6P55061 237 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 CSNK2A1P68400 391 aaPredicted RBP12.81□□□□□ -0.36
NPC1-201ENST00000269228 HTR4Q13639 388 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 MS4A6EQ96DS6 147 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 LGALS12Q96DT0 336 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 SAP130Q9H0E3 1048 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 SHROOM3Q8TF72 1996 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 TARM1B6A8C7 271 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 HCRTR1O43613 425 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 IGHEP01854 428 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 CD46P15529 392 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 GABARAPL2P60520 117 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 ZNF829Q3KNS6 432 aaPredicted RBP12.81□□□□□ -0.36
NPC1-201ENST00000269228 COX20Q5RI15 118 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 LINC00696Q6ZRV3 163 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 LIX1LQ8IVB5 337 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 TRUB1Q8WWH5 349 aaKnown RBP12.81□□□□□ -0.36
NPC1-201ENST00000269228 PRDM9Q9NQV7 894 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 MMACHCQ9Y4U1 282 aa12.81□□□□□ -0.36
NPC1-201ENST00000269228 A6NIZ1 184 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 MAS1P04201 325 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 VAMP1P23763 118 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 TSFMP43897 325 aaKnown RBP12.8□□□□□ -0.36
NPC1-201ENST00000269228 RAP1BP61224 184 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 RAP1AP62834 184 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 TCTN1Q2MV58 587 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 PROX2Q3B8N5 592 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 MANEAQ5SRI9 462 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 BCL2L15Q5TBC7 163 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 TMED4Q7Z7H5 227 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 TIGD4Q8IY51 512 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 DTX3Q8N9I9 347 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 NUDT8Q8WV74 236 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 LCORQ96JN0 433 aaPredicted RBP12.8□□□□□ -0.36
NPC1-201ENST00000269228 TEX37Q96LM6 180 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 PAK1IP1Q9NWT1 392 aaPredicted RBP12.8□□□□□ -0.36
NPC1-201ENST00000269228 BOKQ9UMX3 212 aaPredicted RBP12.8□□□□□ -0.36
NPC1-201ENST00000269228 WDR37Q9Y2I8 494 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 ZNF831Q5JPB2 1677 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 A0A0X1KG70 313 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 SLC6A12P48065 614 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 EPHA5P54756 1037 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 CDK5R2Q13319 367 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 MED25Q71SY5 747 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 Q7L0L9 218 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 FUNDC1Q8IVP5 155 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 CCDC107Q8WV48 283 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 IGHV3-20A0A0C4DH32 117 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 GGT3PA6NGU5 568 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 METTL12A8MUP2 240 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 MBTPS2O43462 519 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 GYPBP06028 91 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 SSR4P51571 173 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 PRKCDQ05655 676 aa12.8□□□□□ -0.36
NPC1-201ENST00000269228 NKAIN1Q4KMZ8 207 aa12.8□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms