RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 ATP6V1C2Q8NEY4 427 aa6.57□□□□□ -1.36
DEPDC1B-201ENST00000265036 OR10A6Q8NH74 314 aa6.57□□□□□ -1.36
DEPDC1B-201ENST00000265036 C1GALT1C1Q96EU7 318 aa6.57□□□□□ -1.36
DEPDC1B-201ENST00000265036 CCDC120Q96HB5 630 aa6.57□□□□□ -1.36
DEPDC1B-201ENST00000265036 SPG11Q96JI7 2443 aa6.57□□□□□ -1.36
DEPDC1B-201ENST00000265036 ANKRD27Q96NW4 1050 aa6.57□□□□□ -1.36
DEPDC1B-201ENST00000265036 CCT8L2Q96SF2 557 aa6.57□□□□□ -1.36
DEPDC1B-201ENST00000265036 ADAM21Q9UKJ8 722 aa6.57□□□□□ -1.36
DEPDC1B-201ENST00000265036 PACSIN3Q9UKS6 424 aa6.57□□□□□ -1.36
DEPDC1B-201ENST00000265036 DTNAQ9Y4J8 743 aa6.57□□□□□ -1.36
DEPDC1B-201ENST00000265036 FREM1Q5H8C1 2179 aa6.57□□□□□ -1.36
DEPDC1B-201ENST00000265036 OR2M5A3KFT3 312 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 SERINC4A6NH21 518 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 CCT8L1PA6NM43 557 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 EVPLLA8MZ36 301 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 C5orf58C9J3I9 102 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 ZIC3O60481 467 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 AK1P00568 194 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 STSP08842 583 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 TFPTP0C1Z6 253 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 GKN3PP0CG01 181 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 ESRRAP11474 423 aaPredicted RBP6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 COX4I1P13073 169 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 IL7RP16871 459 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 SRD5A2P31213 254 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 CA7P43166 264 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 NUDT2P50583 147 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 ANXA11P50995 505 aaKnown RBP6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 CRISP3P54108 245 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 CLDN20P56880 219 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 HOXC5Q00444 222 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 CRYZQ08257 329 aaKnown RBP6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 FOXF1Q12946 379 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 CYLC2Q14093 348 aaPredicted RBP6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 GXYLT1Q4G148 440 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 KLHL26Q53HC5 615 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 GCNT6Q5T4J0 391 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 MRPL2Q5T653 305 aaKnown RBP6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 MARVELD2Q8N4S9 558 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 B4GALNT2Q8NHY0 566 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 FAM57AQ8TBR7 257 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 CNOT9Q92600 299 aaKnown RBP6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 NTNG2Q96CW9 530 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 RNF145Q96MT1 663 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 CCDC106Q9BWC9 280 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 PTGES2Q9H7Z7 377 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 SDHAF3Q9NRP4 125 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 FAM53CQ9NYF3 392 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 ABCA4P78363 2273 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 PRR14LQ5THK1 2151 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 TMEM247A6NEH6 219 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 H3BNH8 94 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 AQP7O14520 342 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 AP3D1O14617 1153 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 ZNF264O43296 627 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 AGR2O95994 175 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 PTNP21246 168 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 SFTPDP35247 375 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 ZNF41P51814 821 aaPredicted RBP6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 CASP6P55212 293 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 DSCR4P56555 118 aaPredicted RBP6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 FADDQ13158 208 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 SKP2Q13309 424 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 CDSNQ15517 529 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 ZNF630Q2M218 657 aaPredicted RBP6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 RUNDC3AQ59EK9 446 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 HIST2H2BCQ6DN03 193 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 NANOGP8Q6NSW7 305 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 RPTNQ6XPR3 784 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 ZNF836Q6ZNA1 936 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 COMTD1Q86VU5 262 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 FAM26EQ8N5C1 309 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 DPP10Q8N608 796 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 WDR60Q8WVS4 1066 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 ABTB1Q969K4 478 aaPredicted RBP6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 SARAFQ96BY9 339 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 LRRC58Q96CX6 371 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 TRNT1Q96Q11 434 aaKnown RBP6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 TIMP4Q99727 224 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 OR2B2Q9GZK3 357 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 NANOGQ9H9S0 305 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 ACKR4Q9NPB9 350 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 MED17Q9NVC6 651 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 ICAM5Q9UMF0 924 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 SLC5A6Q9Y289 635 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 ZNF337Q9Y3M9 751 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 FAM215AQ9Y5M1 114 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 LRBAP50851 2863 aa6.56□□□□□ -1.36
DEPDC1B-201ENST00000265036 ROS1P08922 2347 aa6.55□□□□□ -1.36
DEPDC1B-201ENST00000265036 ALPK2Q86TB3 2170 aa6.55□□□□□ -1.36
DEPDC1B-201ENST00000265036 AGAP5A6NIR3 686 aa6.55□□□□□ -1.36
DEPDC1B-201ENST00000265036 SUSD5O60279 629 aa6.55□□□□□ -1.36
DEPDC1B-201ENST00000265036 CCDC22O60826 627 aa6.55□□□□□ -1.36
DEPDC1B-201ENST00000265036 NGFRP08138 427 aa6.55□□□□□ -1.36
DEPDC1B-201ENST00000265036 CCNA2P20248 432 aa6.55□□□□□ -1.36
DEPDC1B-201ENST00000265036 POU3F2P20265 443 aaPredicted RBP6.55□□□□□ -1.36
DEPDC1B-201ENST00000265036 SHC1P29353 583 aa6.55□□□□□ -1.36
DEPDC1B-201ENST00000265036 AGFG1P52594 562 aaKnown RBP6.55□□□□□ -1.36
DEPDC1B-201ENST00000265036 GFRA1P56159 465 aa6.55□□□□□ -1.36
DEPDC1B-201ENST00000265036 B3GALT5-AS1P59052 145 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms