RNA–Protein interactions for RNA: ENST00000263741.11

SDF4-201, Transcript of stromal cell derived factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDF4, Length 2,079 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-201ENST00000263741 KLHL26Q53HC5 615 aa16.7■□□□□ 0.26
SDF4-201ENST00000263741 SPPL2CQ8IUH8 684 aa16.7■□□□□ 0.26
SDF4-201ENST00000263741 SLC6A15Q9H2J7 730 aa16.7■□□□□ 0.26
SDF4-201ENST00000263741 DSN1Q9H410 356 aa16.7■□□□□ 0.26
SDF4-201ENST00000263741 MAGEA8P43361 318 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 CLK3P49761 638 aaKnown RBP16.69■□□□□ 0.26
SDF4-201ENST00000263741 CRISP3P54108 245 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 PLCZ1Q86YW0 608 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 FAM109AQ8N4B1 249 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 ZNF527Q8NB42 609 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 OR8J3Q8NGG0 315 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 SLC26A7Q8TE54 656 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 SAP130Q9H0E3 1048 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 UBQLN3Q9H347 655 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 TNFRSF10DQ9UBN6 386 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 DTNAQ9Y4J8 743 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 TRAPPC6AO75865 159 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 FESP07332 822 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 ELAVL4P26378 380 aaKnown RBP16.69■□□□□ 0.26
SDF4-201ENST00000263741 LCN1P31025 176 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 SLC7A2P52569 658 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 CDK6Q00534 326 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 ZNF117Q03924 483 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 MRPL49Q13405 166 aaKnown RBP16.69■□□□□ 0.26
SDF4-201ENST00000263741 SCARB2Q14108 478 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 ZNF141Q15928 474 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 PGM2L1Q6PCE3 622 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 CBLN3Q6UW01 205 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 ZZZ3Q8IYH5 903 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 DEFB107AQ8IZN7 70 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 OR2M3Q8NG83 312 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 OR4K17Q8NGC6 315 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 MIB2Q96AX9 1013 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 GPATCH1Q9BRR8 931 aaKnown RBP16.69■□□□□ 0.26
SDF4-201ENST00000263741 ZDHHC11Q9H8X9 412 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 CMTM6Q9NX76 183 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 B4GALT7Q9UBV7 327 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 CARD8Q9Y2G2 431 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 DSPPQ9NZW4 1301 aa16.69■□□□□ 0.26
SDF4-201ENST00000263741 MYO18BQ8IUG5 2567 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 HIVEP3Q5T1R4 2406 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 TMEM247A6NEH6 219 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 C5orf58C9J3I9 102 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 NPPAP01160 153 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 UQCRFS1P47985 274 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 GZMMP51124 257 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 FOXK1P85037 733 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 PLAURQ03405 335 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 HYAL4Q2M3T9 481 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 C16orf89Q6UX73 402 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 YRDCQ86U90 279 aaKnown RBP16.68■□□□□ 0.26
SDF4-201ENST00000263741 VRK2Q86Y07 508 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 GPR137Q96N19 417 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 HOXD1Q9GZZ0 328 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 POLE3Q9NRF9 147 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 PACSIN3Q9UKS6 424 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 PRPF19Q9UMS4 504 aaKnown RBP16.68■□□□□ 0.26
SDF4-201ENST00000263741 SERINC4A6NH21 518 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 NME4O00746 187 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 HCRTR2O43614 444 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 CYP7B1O75881 506 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 UBTFL6P0CB48 400 aaPredicted RBP16.68■□□□□ 0.26
SDF4-201ENST00000263741 EIPR1Q53HC9 387 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 C8orf82Q6P1X6 216 aaPredicted RBP16.68■□□□□ 0.26
SDF4-201ENST00000263741 ZNF605Q86T29 641 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 IFNEQ86WN2 208 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 TMCO5AQ8N6Q1 288 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 FADS6Q8N9I5 356 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 KLHL4Q9C0H6 718 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 THUMPD1Q9NXG2 353 aaKnown RBP16.68■□□□□ 0.26
SDF4-201ENST00000263741 SEC14L3Q9UDX4 400 aa16.68■□□□□ 0.26
SDF4-201ENST00000263741 A0A1W2PQD3 144 aa16.67■□□□□ 0.26
SDF4-201ENST00000263741 AGAP5A6NIR3 686 aa16.67■□□□□ 0.26
SDF4-201ENST00000263741 PDE5AO76074 875 aa16.67■□□□□ 0.26
SDF4-201ENST00000263741 PGM3O95394 542 aa16.67■□□□□ 0.26
SDF4-201ENST00000263741 CCR4P51679 360 aa16.67■□□□□ 0.26
SDF4-201ENST00000263741 C17orf67Q0P5P2 114 aa16.67■□□□□ 0.26
SDF4-201ENST00000263741 WIPI1Q5MNZ9 446 aaPredicted RBP16.67■□□□□ 0.26
SDF4-201ENST00000263741 SLC15A3Q8IY34 581 aa16.67■□□□□ 0.26
SDF4-201ENST00000263741 FAM83FQ8NEG4 500 aaPredicted RBP16.67■□□□□ 0.26
SDF4-201ENST00000263741 CCDC124Q96CT7 223 aaKnown RBP16.67■□□□□ 0.26
SDF4-201ENST00000263741 TMEM38AQ9H6F2 299 aa16.67■□□□□ 0.26
SDF4-201ENST00000263741 SDHAF3Q9NRP4 125 aa16.67■□□□□ 0.26
SDF4-201ENST00000263741 DKKL1Q9UK85 242 aa16.67■□□□□ 0.26
SDF4-201ENST00000263741 RPH3AQ9Y2J0 694 aaPredicted RBP16.67■□□□□ 0.26
SDF4-201ENST00000263741 SHISA8B8ZZ34 492 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 LYNP07948 512 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 UBL4AP11441 157 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 RPS4Y1P22090 263 aaKnown RBP16.66■□□□□ 0.26
SDF4-201ENST00000263741 PSME3P61289 254 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 CCNIQ14094 377 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 FGFBP1Q14512 234 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 ARSKQ6UWY0 536 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 GFRALQ6UXV0 394 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 HACD2Q6Y1H2 254 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 SERPINA11Q86U17 422 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 C11orf65Q8NCR3 313 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 OR5M1Q8NGP8 315 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 PYDC1Q8WXC3 89 aa16.66■□□□□ 0.26
SDF4-201ENST00000263741 RSPO3Q9BXY4 272 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms