RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 ALG1L2C9J202 215 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 GTPBP1O00178 669 aaKnown RBP8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 TAF4O00268 1085 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 SYT5O00445 386 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 CLOCKO15516 846 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 NDUFB5O43674 189 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 FASP25445 335 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 HTR2AP28223 471 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 CD96P40200 585 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 PTGDSP41222 190 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 ACAA2P42765 397 aaKnown RBP8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 GAS1P54826 345 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 RRADP55042 308 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 KCNC4Q03721 635 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF117Q03924 483 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 KCNAB2Q13303 367 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 PIN1Q13526 163 aaPredicted RBP8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 LAPTM4AQ15012 233 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 LRRC36Q1X8D7 754 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 ABHD17BQ5VST6 288 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 LPCAT4Q643R3 524 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 SPINK14Q6IE38 97 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 CCDC81Q6ZN84 652 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF227Q86WZ6 799 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 HS3ST5Q8IZT8 346 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 TMCO5AQ8N6Q1 288 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 ICA1LQ8NDH6 482 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 OR52J3Q8NH60 311 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 NRG4Q8WWG1 115 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 TMCO6Q96DC7 493 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF300Q96RE9 604 aaPredicted RBP8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 ZNF552Q9H707 407 aaPredicted RBP8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 METTL7AQ9H8H3 244 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 TRIM45Q9H8W5 580 aaPredicted RBP8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 HPF1Q9NWY4 346 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 KLHL28Q9NXS3 571 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 KLRF1Q9NZS2 232 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 SLC9A8Q9Y2E8 581 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 KCNMB2Q9Y691 235 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 FREM3P0C091 2139 aa8.9□□□□□ -0.98
SNRNP40-201ENST00000263694 LOC400499M0QZD8 3231 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 SAC3D1A6NKF1 404 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 GNGT2O14610 69 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 HCRTR2O43614 444 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 WISP1O95388 367 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 WDPCPO95876 746 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 LDLRP01130 860 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 THY1P04216 161 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 NGFRP08138 427 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 UBL4AP11441 157 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 PTNP21246 168 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 LCN1P31025 176 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 RRM2P31350 389 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 CASP3P42574 277 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 TMED10P49755 219 aaKnown RBP8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 CCR4P51679 360 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 PSPHP78330 225 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 OC90Q02509 493 aaPredicted RBP8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 TLE3Q04726 772 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 SLC34A1Q06495 639 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 SKP2Q13309 424 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 ATP6AP1Q15904 470 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 CRTC2Q53ET0 693 aaPredicted RBP8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 EIPR1Q53HC9 387 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 ENTPD8Q5MY95 495 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 ANKRD34AQ69YU3 496 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 OR2T5Q6IEZ7 315 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 PIWIL3Q7Z3Z3 882 aaKnown RBP8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 CYP4Z2PQ8N1L4 340 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 FDCSPQ8NFU4 85 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 OR2T29Q8NH02 315 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 RNF138Q8WVD3 245 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 TTC9Q92623 222 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 SIGLEC12Q96PQ1 595 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 MCHR1Q99705 422 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 BARD1Q99728 777 aaKnown RBP8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 HES7Q9BYE0 225 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 PROK2Q9HC23 129 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 SH2D2AQ9NP31 389 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 MED11Q9P086 117 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 DKK4Q9UBT3 224 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 A4GNTQ9UNA3 340 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 PTPRQQ9UMZ3 2332 aa8.9□□□□□ -0.99
SNRNP40-201ENST00000263694 NCKAP5O14513 1909 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 A0A0G2JMM0 328 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 A0A1W2PPB8 328 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 A0A1W2PQD3 144 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 A0A1W2PRS3 328 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 KIR3DP1A8MWS1 328 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 PDLIM1O00151 329 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 TP53I11O14683 189 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 ZNF264O43296 627 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 CDC40O60508 579 aaKnown RBP eCLIP8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 PRSS23O95084 383 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 PRKACGP22612 351 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 ADH7P40394 386 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 CYB561P49447 251 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 HLCSP50747 726 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 CDH12P55289 794 aa8.89□□□□□ -0.99
SNRNP40-201ENST00000263694 SOX8P57073 446 aa8.89□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms