RNA–Protein interactions for RNA: ENST00000263398.10

CD44-201, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 4,589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-201ENST00000263398 RASD1Q9Y272 281 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 FAM183AA6NL82 134 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 H3BUI4 141 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 SYT7O43581 403 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 ZNF43P17038 809 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 P2RY2P41231 377 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 NR0B1P51843 470 aaKnown RBP10.1□□□□□ -0.79
CD44-201ENST00000263398 COL9A2Q14055 689 aaPredicted RBP10.1□□□□□ -0.79
CD44-201ENST00000263398 ENTPD8Q5MY95 495 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 FAM205BPQ63HN1 556 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 SLC6A19Q695T7 634 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 MEPCEQ7L2J0 689 aaKnown RBP10.1□□□□□ -0.79
CD44-201ENST00000263398 OR2A12Q8NGT7 310 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 TBC1D15Q8TC07 691 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 LKAAEAR1Q8TD35 194 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 CHPT1Q8WUD6 406 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 MAFIPQ8WZ33 124 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 LMF2Q9BU23 707 aaKnown RBP10.1□□□□□ -0.79
CD44-201ENST00000263398 POT1Q9NUX5 634 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 ZNF217O75362 1048 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 RFPL3O75679 317 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 KCNK5O95279 499 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 KLKB1P03952 638 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 UQCRC1P31930 480 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 PER3P56645 1201 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 TLE3Q04726 772 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 GLO1Q04760 184 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 RIN1Q13671 783 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 LEXMQ3ZCV2 418 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 BCL7AQ4VC05 210 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 UBE2UQ5VVX9 321 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 HMBOX1Q6NT76 420 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 SLCO4C1Q6ZQN7 724 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 TMEM150AQ86TG1 271 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 CUEDC1Q9NWM3 386 aaPredicted RBP10.1□□□□□ -0.79
CD44-201ENST00000263398 PSORS1C1Q9UIG5 152 aa10.1□□□□□ -0.79
CD44-201ENST00000263398 A0A0A6YYC8 382 aaPredicted RBP10.09□□□□□ -0.79
CD44-201ENST00000263398 I3L1I5 382 aaPredicted RBP10.09□□□□□ -0.79
CD44-201ENST00000263398 J3KTA2 159 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 ARPC5O15511 151 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 CEBPBP17676 345 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 PTGER1P34995 402 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 ALDH3B2P48448 385 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 DLX2Q07687 328 aaPredicted RBP10.09□□□□□ -0.79
CD44-201ENST00000263398 HACD4Q5VWC8 232 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 WDR53Q7Z5U6 358 aaPredicted RBP10.09□□□□□ -0.79
CD44-201ENST00000263398 TPRA1Q86W33 373 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 MRPL43Q8N983 215 aaKnown RBP10.09□□□□□ -0.79
CD44-201ENST00000263398 GALNT6Q8NCL4 622 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 OR5H2Q8NGV7 314 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 RGCCQ9H4X1 137 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 ZNF442Q9H7R0 627 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 ZNF334Q9HCZ1 680 aaPredicted RBP10.09□□□□□ -0.79
CD44-201ENST00000263398 APMAPQ9HDC9 416 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 ABRACLQ9P1F3 81 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 B4GALT7Q9UBV7 327 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 NPIPA5A0A0B4J1W7 369 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 DCDC2BA2VCK2 349 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 ZNF705EA8MWA4 302 aaPredicted RBP10.09□□□□□ -0.79
CD44-201ENST00000263398 NPIPA7E9PJI5 369 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 GPR75O95800 540 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 PLATP00750 562 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 IFNA2P01563 188 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 CSF1P09603 554 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 NPIPA8P0DM63 369 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 GPX2P18283 190 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 THBS2P35442 1172 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 MECP2P51608 486 aaKnown RBP10.09□□□□□ -0.79
CD44-201ENST00000263398 DEFB103AP81534 67 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 PAPPAQ13219 1627 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 GPR19Q15760 415 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 FAM69BQ5VUD6 431 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 KIAA1211LQ6NV74 962 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 PXKQ7Z7A4 578 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 GTPBP8Q8N3Z3 284 aaPredicted RBP10.09□□□□□ -0.79
CD44-201ENST00000263398 SLC38A5Q8WUX1 472 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 SYT3Q9BQG1 590 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 IL37Q9NZH6 218 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 V9GY05 133 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 A6NIZ1 184 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 C17orf105B2RV13 164 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 HPGDSO60760 199 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 LDB3O75112 727 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 IFNA5P01569 189 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 PSMB5P28074 263 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 RAP1BP61224 184 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 RAP1AP62834 184 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 KCNJ10P78508 379 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 AWAT2Q6E213 333 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 BEND4Q6ZU67 534 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 VRK2Q86Y07 508 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 UEVLDQ8IX04 471 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 DDIT4LQ96D03 193 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 C4orf36Q96KX1 117 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 INTS14Q96SY0 518 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 PHB2Q99623 299 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 ZFP57Q9NU63 452 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 KCMF1Q9P0J7 381 aa10.09□□□□□ -0.79
CD44-201ENST00000263398 PRAMEF26H0Y7S4 382 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms