RNA–Protein interactions for RNA: ENST00000263202.14

UFD1-201, Transcript of ubiquitin recognition factor in ER associated degradation 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UFD1, Length 1,814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UFD1-201ENST00000263202 FOXD4Q12950 439 aaPredicted RBP20.78■□□□□ 0.92
UFD1-201ENST00000263202 CLN3Q13286 438 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 DAG1Q14118 895 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 ZNF791Q3KP31 576 aaPredicted RBP20.78■□□□□ 0.92
UFD1-201ENST00000263202 DCAF10Q5QP82 559 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 ANKRD34AQ69YU3 496 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 PLEKHM3Q6ZWE6 761 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 ZNF550Q7Z398 422 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 MAGEE2Q8TD90 523 aaPredicted RBP20.78■□□□□ 0.92
UFD1-201ENST00000263202 GRHL3Q8TE85 626 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 RNF138Q8WVD3 245 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 ALPK1Q96QP1 1244 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 SCNM1Q9BWG6 230 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 OSBPL10Q9BXB5 764 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 POLR2J2Q9GZM3 115 aaKnown RBP20.78■□□□□ 0.92
UFD1-201ENST00000263202 POLR2J3Q9H1A7 115 aaKnown RBP20.78■□□□□ 0.92
UFD1-201ENST00000263202 SMURF2Q9HAU4 748 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 MAN2C1Q9NTJ4 1040 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 A0A1W2PRQ8 180 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 C7orf72A4D263 438 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 H0YJX3 145 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 ADAM10O14672 748 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 OIP5O43482 229 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 CYP7B1O75881 506 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 OR6B1O95007 311 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 ALPLP05186 524 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 ELAVL4P26378 380 aaKnown RBP20.78■□□□□ 0.92
UFD1-201ENST00000263202 ALDH3A2P51648 485 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 PPP2R2BQ00005 443 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 SKP2Q13309 424 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 DGCR6Q14129 220 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 MICAQ29983 383 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 BRIX1Q8TDN6 353 aaKnown RBP20.78■□□□□ 0.92
UFD1-201ENST00000263202 PSMF1Q92530 271 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 NAF1Q96HR8 494 aaKnown RBP20.78■□□□□ 0.92
UFD1-201ENST00000263202 THOC3Q96J01 351 aaKnown RBP20.78■□□□□ 0.92
UFD1-201ENST00000263202 ZNF597Q96LX8 424 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 ZNF559Q9BR84 538 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 FUZQ9BT04 418 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 EXOSC3Q9NQT5 275 aaKnown RBP20.78■□□□□ 0.92
UFD1-201ENST00000263202 CARD8Q9Y2G2 431 aa20.78■□□□□ 0.92
UFD1-201ENST00000263202 TRBV4-1A0A0J9YWV2 114 aa20.77■□□□□ 0.92
UFD1-201ENST00000263202 GTPBP1O00178 669 aaKnown RBP20.77■□□□□ 0.92
UFD1-201ENST00000263202 ZNF264O43296 627 aa20.77■□□□□ 0.92
UFD1-201ENST00000263202 NDUFB5O43674 189 aa20.77■□□□□ 0.92
UFD1-201ENST00000263202 OR5F1O95221 314 aa20.77■□□□□ 0.92
UFD1-201ENST00000263202 THY1P04216 161 aa20.77■□□□□ 0.92
UFD1-201ENST00000263202 SSR4P51571 173 aa20.77■□□□□ 0.92
UFD1-201ENST00000263202 OR1Q1Q15612 314 aa20.77■□□□□ 0.92
UFD1-201ENST00000263202 FGD3Q5JSP0 725 aa20.77■□□□□ 0.92
UFD1-201ENST00000263202 ATP1A1-AS1Q5TC04 95 aa20.77■□□□□ 0.92
UFD1-201ENST00000263202 OPN5Q6U736 354 aa20.77■□□□□ 0.92
UFD1-201ENST00000263202 ZNF440Q8IYI8 595 aa20.77■□□□□ 0.92
UFD1-201ENST00000263202 SIRT6Q8N6T7 355 aa20.77■□□□□ 0.92
UFD1-201ENST00000263202 DNAJC9Q8WXX5 260 aa20.77■□□□□ 0.92
UFD1-201ENST00000263202 RBM4BQ9BQ04 359 aaKnown RBP20.77■□□□□ 0.92
UFD1-201ENST00000263202 RBM4Q9BWF3 364 aaKnown RBP20.77■□□□□ 0.92
UFD1-201ENST00000263202 USE1Q9NZ43 259 aa20.77■□□□□ 0.92
UFD1-201ENST00000263202 LRRC42Q9Y546 428 aa20.77■□□□□ 0.92
UFD1-201ENST00000263202 DLGAP1O14490 977 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 SCO2O43819 266 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 ANGPTL1O95841 491 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 HPRP00739 348 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 ST13P50502 369 aaKnown RBP20.76■□□□□ 0.91
UFD1-201ENST00000263202 ST3GAL3Q11203 375 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 EPS8Q12929 822 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 JMJD6Q6NYC1 403 aaPredicted RBP20.76■□□□□ 0.91
UFD1-201ENST00000263202 CBLN3Q6UW01 205 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 OR10G3Q8NGC4 313 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 GIPC3Q8TF64 312 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 ASB15Q8WXK1 588 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 SLC41A3Q96GZ6 507 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 FER1L6-AS2Q96M78 137 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 ATP13A2Q9NQ11 1180 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 RYDENQ9NUL5 291 aaKnown RBP20.76■□□□□ 0.91
UFD1-201ENST00000263202 DCHS1Q96JQ0 3298 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 ENDOUP21128 410 aaKnown RBP20.76■□□□□ 0.91
UFD1-201ENST00000263202 IFNA8P32881 189 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 AIMP2Q13155 320 aaKnown RBP20.76■□□□□ 0.91
UFD1-201ENST00000263202 SEC23BQ15437 767 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 DCST1Q5T197 706 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 B3GNTL1Q67FW5 361 aaPredicted RBP20.76■□□□□ 0.91
UFD1-201ENST00000263202 GDF7Q7Z4P5 450 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 SLC7A13Q8TCU3 470 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 LAT2Q9GZY6 243 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 TMCC3Q9ULS5 477 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 EML6Q6ZMW3 1958 aa20.76■□□□□ 0.91
UFD1-201ENST00000263202 CPAMD8Q8IZJ3 1885 aa20.75■□□□□ 0.91
UFD1-201ENST00000263202 TRAPPC13A5PLN9 417 aa20.75■□□□□ 0.91
UFD1-201ENST00000263202 C17orf51A8MQB3 221 aa20.75■□□□□ 0.91
UFD1-201ENST00000263202 CCNB2O95067 398 aa20.75■□□□□ 0.91
UFD1-201ENST00000263202 WT1P19544 449 aaPredicted RBP20.75■□□□□ 0.91
UFD1-201ENST00000263202 CLK3P49761 638 aaKnown RBP20.75■□□□□ 0.91
UFD1-201ENST00000263202 DAPP51397 102 aa20.75■□□□□ 0.91
UFD1-201ENST00000263202 ZNF117Q03924 483 aa20.75■□□□□ 0.91
UFD1-201ENST00000263202 TRAM2Q15035 370 aa20.75■□□□□ 0.91
UFD1-201ENST00000263202 IL20RBQ6UXL0 311 aa20.75■□□□□ 0.91
UFD1-201ENST00000263202 LSMEM1Q8N8F7 131 aa20.75■□□□□ 0.91
UFD1-201ENST00000263202 OR10G2Q8NGC3 310 aa20.75■□□□□ 0.91
UFD1-201ENST00000263202 PSD2Q9BQI7 771 aa20.75■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms