RNA–Protein interactions for RNA: ENST00000261811.5

CYSTM1-201, Transcript of cysteine rich transmembrane module containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CYSTM1, Length 1,336 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYSTM1-201ENST00000261811 AP3M1Q9Y2T2 418 aa17.03■□□□□ 0.32
CYSTM1-201ENST00000261811 IFT52Q9Y366 437 aa17.03■□□□□ 0.32
CYSTM1-201ENST00000261811 PRAMEF27A3QJZ7 478 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 AGAP5A6NIR3 686 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 CCL21O00585 134 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 GMFGO60234 142 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 SHOX2O60902 331 aaPredicted RBP17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 TNFRSF21O75509 655 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 AGFG2O95081 481 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 GABRA1P14867 456 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 PRDX6P30041 224 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 KCNJ10P78508 379 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 RBBP4Q09028 425 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 ART3Q13508 389 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 CBFBQ13951 182 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 CD226Q15762 336 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 C1QL3Q5VWW1 255 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 RAET1LQ5VY80 246 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 REEP3Q6NUK4 255 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 ARPINQ7Z6K5 226 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 CD163Q86VB7 1156 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 SLC30A8Q8IWU4 369 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 OR8J3Q8NGG0 315 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 RELTQ969Z4 430 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 ZBTB8AQ96BR9 441 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 TMEM19Q96HH6 336 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 ZNF607Q96SK3 696 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 TREX2Q9BQ50 279 aaPredicted RBP17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 ECSITQ9BQ95 431 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 LAT2Q9GZY6 243 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 MYLK2Q9H1R3 596 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 SH3BGRL2Q9UJC5 107 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 SLC6A5Q9Y345 797 aa17.02■□□□□ 0.32
CYSTM1-201ENST00000261811 ADAM10O14672 748 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 LRRTM2O43300 516 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 WDR1O75083 606 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 CYP7B1O75881 506 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 ARAFP10398 606 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 UQCRBP14927 111 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 PTGER4P35408 488 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 EIF1P41567 113 aaKnown RBP17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 CCR4P51679 360 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 MTPNP58546 118 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 CDK6Q00534 326 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 ZNF117Q03924 483 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 CAPRIN1Q14444 709 aaKnown RBP17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 GXYLT1Q4G148 440 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 LIN52Q52LA3 116 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 VASNQ6EMK4 673 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 TMEM211Q6ICI0 200 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 NANOGP8Q6NSW7 305 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 FAM26EQ8N5C1 309 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 POU5F2Q8N7G0 328 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 C11orf65Q8NCR3 313 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 CCDC197Q8NCU1 140 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 OR52P1PQ8NH57 321 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 RCN3Q96D15 328 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 NANOGQ9H9S0 305 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 BCL2L10Q9HD36 194 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 ANGPT4Q9Y264 503 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 RPH3AQ9Y2J0 694 aaPredicted RBP17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 L3MBTL1Q9Y468 752 aa17.01■□□□□ 0.31
CYSTM1-201ENST00000261811 AHRRA9YTQ3 701 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 AIM2O14862 343 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 ZIC3O60481 467 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 THBS1P07996 1170 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 NID1P14543 1247 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 ETS2P15036 469 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 ZNF17P17021 662 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 BMP7P18075 431 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 PGCP20142 388 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 SLC6A8P48029 635 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 SCARB2Q14108 478 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 C3AR1Q16581 482 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 ZNF585AQ6P3V2 769 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 OLIG3Q7RTU3 272 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 SERPINA11Q86U17 422 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 FJX1Q86VR8 437 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 DOLPP1Q86YN1 238 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 ZNF440Q8IYI8 595 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 HIPK4Q8NE63 616 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 OR5W2Q8NH69 310 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 TMEM234Q8WY98 164 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 MAL2Q969L2 176 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 TIMP4Q99727 224 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 RUBCNLQ9H714 662 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 KAT8Q9H7Z6 458 aaKnown RBP17■□□□□ 0.31
CYSTM1-201ENST00000261811 ALKBH4Q9NXW9 302 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 SPRR3Q9UBC9 169 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 KCNE5Q9UJ90 142 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 TINAGQ9UJW2 476 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 PRDM4Q9UKN5 801 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 CAMK2AQ9UQM7 478 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 VDAC3Q9Y277 283 aa17■□□□□ 0.31
CYSTM1-201ENST00000261811 SPENQ96T58 3664 aaKnown RBP17■□□□□ 0.31
CYSTM1-201ENST00000261811 C17orf51A8MQB3 221 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 E9PLN8 166 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 NDUFAB1O14561 156 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 SERPINB7O75635 380 aa16.99■□□□□ 0.31
CYSTM1-201ENST00000261811 PGM3O95394 542 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 50.6 ms