RNA–Protein interactions for RNA: ENST00000261407.8

LPCAT3-201, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LPCAT3, Length 2,268 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-201ENST00000261407 RERGQ96A58 199 aaPredicted RBP17.84■□□□□ 0.45
LPCAT3-201ENST00000261407 MED18Q9BUE0 208 aa17.84■□□□□ 0.45
LPCAT3-201ENST00000261407 IL21RQ9HBE5 538 aa17.84■□□□□ 0.45
LPCAT3-201ENST00000261407 ISYNA1Q9NPH2 558 aa17.84■□□□□ 0.45
LPCAT3-201ENST00000261407 MAT2BQ9NZL9 334 aa17.84■□□□□ 0.45
LPCAT3-201ENST00000261407 GSTK1Q9Y2Q3 226 aa17.84■□□□□ 0.45
LPCAT3-201ENST00000261407 TRAV27A0A087WT01 109 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 TRDV1A0A1B0GX56 115 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 C12orf71A8MTZ7 269 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 J3QRE1 110 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 BHLHE40O14503 412 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 VSX2P58304 361 aaPredicted RBP17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 COPZ1P61923 177 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 KLHL12Q53G59 568 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 ZNF322Q6U7Q0 402 aaPredicted RBP17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 ZNF517Q6ZMY9 492 aaPredicted RBP17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 TMEM91Q6ZNR0 172 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 RANBP3LQ86VV4 465 aaPredicted RBP17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 ZNF614Q8N883 585 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 OR4N2Q8NGD1 307 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 OR6F1Q8NGZ6 308 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 NEIL3Q8TAT5 605 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 TWSG1Q9GZX9 223 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 CACYBPQ9HB71 228 aaKnown RBP17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 FAM60AQ9NP50 221 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 CPNE7Q9UBL6 633 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 FBXL4Q9UKA2 621 aa17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 NDRG2Q9UN36 371 aaKnown RBP17.83■□□□□ 0.45
LPCAT3-201ENST00000261407 OR2W5A6NFC9 320 aa17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 URADA6NGE7 173 aa17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 POLR1CO15160 346 aaPredicted RBP17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 ATP1B1P05026 303 aa17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 GSTT2P0CG29 244 aa17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 GSTT2BP0CG30 244 aa17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 ATXN8OSP0DMR3 200 aa17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 RPS4Y1P22090 263 aaKnown RBP17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 PDZK1Q5T2W1 519 aa17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 XKRXQ6PP77 449 aa17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 GLCCI1Q86VQ1 547 aa17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 NR2C2APQ86WQ0 139 aa17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 OR51A7Q8NH64 312 aa17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 BAHD1Q8TBE0 780 aaPredicted RBP17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 SETD6Q8TBK2 473 aa17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 PTP4A1Q93096 173 aa17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 MRPL38Q96DV4 380 aaKnown RBP17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 CD180Q99467 661 aa17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 MEPEQ9NQ76 525 aaPredicted RBP17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 USP36Q9P275 1121 aaKnown RBP17.83■□□□□ 0.44
LPCAT3-201ENST00000261407 PLA2G10O15496 165 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 GPR75O95800 540 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 THBS1P07996 1170 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 MRPL3P09001 348 aaKnown RBP17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 TYRP1P17643 537 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 NOS3P29474 1203 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 IFITM2Q01629 132 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 EXOSC6Q5RKV6 272 aaKnown RBP17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 SAMD14Q8IZD0 417 aaPredicted RBP17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 SLC7A5P1Q8MH63 180 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 ASB12Q8WXK4 309 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 HS6ST2Q96MM7 605 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 PTCHD1Q96NR3 888 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 ATF6BQ99941 703 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 TEX12Q9BXU0 123 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 LMAN2LQ9H0V9 348 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 PPIL3Q9H2H8 161 aaKnown RBP17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 MED17Q9NVC6 651 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 PIAS3Q9Y6X2 628 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 TDRD6O60522 2096 aaKnown RBP17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 TCRBV21S2A2A0A5A6 115 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 HRKO00198 91 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 AKAP8O43823 692 aaKnown RBP17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 DBIP07108 87 aaKnown RBP17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 SLC16A1P53985 500 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 SCN1BQ07699 218 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 C1orf61Q13536 156 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 NIPAL3Q6P499 406 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 CNIH2Q6PI25 160 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 CA13Q8N1Q1 262 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 CYB561A3Q8NBI2 242 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 CAPSLQ8WWF8 208 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 CNOT9Q92600 299 aaKnown RBP17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 ANKRD9Q96BM1 317 aaPredicted RBP17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 NEK6Q9HC98 313 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 SLCO1B1Q9Y6L6 691 aa17.82■□□□□ 0.44
LPCAT3-201ENST00000261407 PLOD3O60568 738 aa17.81■□□□□ 0.44
LPCAT3-201ENST00000261407 GALR3O60755 368 aaPredicted RBP17.81■□□□□ 0.44
LPCAT3-201ENST00000261407 RDH16O75452 317 aa17.81■□□□□ 0.44
LPCAT3-201ENST00000261407 HMGN1P05114 100 aa17.81■□□□□ 0.44
LPCAT3-201ENST00000261407 IL9P15248 144 aa17.81■□□□□ 0.44
LPCAT3-201ENST00000261407 EIPR1Q53HC9 387 aa17.81■□□□□ 0.44
LPCAT3-201ENST00000261407 ATAD3CQ5T2N8 411 aa17.81■□□□□ 0.44
LPCAT3-201ENST00000261407 CSNK1A1LQ8N752 337 aa17.81■□□□□ 0.44
LPCAT3-201ENST00000261407 CDRT4Q8N9R6 151 aa17.81■□□□□ 0.44
LPCAT3-201ENST00000261407 BRIX1Q8TDN6 353 aaKnown RBP17.81■□□□□ 0.44
LPCAT3-201ENST00000261407 SLC37A2Q8TED4 501 aa17.81■□□□□ 0.44
LPCAT3-201ENST00000261407 KISS1RQ969F8 398 aaPredicted RBP17.81■□□□□ 0.44
LPCAT3-201ENST00000261407 BPIFA2Q96DR5 249 aa17.81■□□□□ 0.44
LPCAT3-201ENST00000261407 RNF32Q9H0A6 362 aa17.81■□□□□ 0.44
LPCAT3-201ENST00000261407 OR51V1Q9H2C8 321 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms